Vibrio neocaledonicus: D3H41_17740
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Entry
D3H41_17740 CDS
T06228
Name
(GenBank) exonuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
vnl
Vibrio neocaledonicus
Brite
KEGG Orthology (KO) [BR:
vnl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vnl03400
]
D3H41_17740
DNA repair and recombination proteins [BR:
vnl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
D3H41_17740
Archaeal homologous recombinant proteins
D3H41_17740
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
FBPase_2
B12-binding
Motif
Other DBs
NCBI-ProteinID:
QCO87878
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All DBs
Position
2:201162..202295
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AA seq
377 aa
AA seq
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MKFIHTSDWHLGRQFHNVSLLEDQQAVLEQLINYIERNPVDAVVVAGDIYDRSVPPTVAI
ELLNRVVKRICTELETPMILISGNHDGAERLGFGSEQMKNAGLHIVSNFEEMLTPIIIKT
DSADEVAFYGMPYNDPEQVRFAYKASVSTHDEAHQLLVEQIKERFISKQKRVLVSHCFVD
GAIESDSERPLSIGGSDRVSHEHFLDFDYVALGHLHQPQKKGAEHIRYSGSLMKYSFGEQ
NQRKGFTLVELDKKGFVSAEHIDLTAPHEMRIVEGELDKVIDQGKTDPKNEDYLLVRLMD
KHAILNPMEKLRSVYPNVLHLEKPGMLIGVEQEMAQAKLARSEIDMFRDFFIEAQDSQLS
KEQEQAVTDIIKQLSQQ
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttatccacacctcagattggcatcttggtcgacaattccacaacgtatcacta
ctcgaagatcaacaagcagtactcgaacaactgattaactatattgaacgcaaccccgtc
gatgcagttgtagtggcgggagatatctatgaccgttcggtgccaccaacggttgcaata
gaactgttaaatcgagtcgtgaaacgcatttgtaccgagttagaaacaccaatgatattg
atatctggcaaccatgatggtgcagaaaggttaggtttcggctcagagcaaatgaaaaat
gcaggtctccatattgttagcaactttgaagagatgctcactcccatcatcataaaaacg
gactctgcggacgaggtcgcgttttatggtatgccttataacgaccctgaacaggtcagg
tttgcctacaaagcctcggtatccactcatgatgaggctcatcaattgcttgttgagcaa
attaaagagcgctttatctctaagcaaaagcgcgtgctcgtgagtcactgttttgttgat
ggggctatcgagtcagactctgaacgaccattatctattggtggttctgatcgcgtgagt
catgaacacttcttagattttgactacgtcgcacttggtcatttgcatcagcctcaaaag
aaaggcgcagagcatatccgttactctggctctctcatgaagtatagctttggtgaacag
aaccagagaaaaggtttcacgttagttgaactggacaagaaaggatttgtttctgcagag
catattgatcttacggctcctcatgaaatgcgcattgtagagggcgagctggataaagtt
attgatcaaggcaaaacagaccctaagaatgaagattatttgttagttcgcttgatggat
aaacatgcgattttaaacccaatggaaaaacttcgttcagtgtatccaaacgttttacac
cttgagaaacctggcatgttaattggggtagagcaggaaatggcgcaagcaaagttggcg
cgaagcgaaattgatatgttccgagatttttttattgaggcgcaagatagccagttgtct
aaagagcaagagcaagctgttactgacattattaagcaattatcacagcaatag
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