Vibrio neocaledonicus: D3H41_18740
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Entry
D3H41_18740 CDS
T06228
Symbol
gcvP
Name
(GenBank) glycine dehydrogenase (aminomethyl-transferring)
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
vnl
Vibrio neocaledonicus
Pathway
vnl00260
Glycine, serine and threonine metabolism
vnl00630
Glyoxylate and dicarboxylate metabolism
vnl00670
One carbon pool by folate
vnl00785
Lipoic acid metabolism
vnl01100
Metabolic pathways
vnl01110
Biosynthesis of secondary metabolites
vnl01200
Carbon metabolism
Module
vnl_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
vnl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
D3H41_18740 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
D3H41_18740 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
D3H41_18740 (gcvP)
00670 One carbon pool by folate
D3H41_18740 (gcvP)
Enzymes [BR:
vnl01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
D3H41_18740 (gcvP)
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GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
QCO88064
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All DBs
Position
2:410065..412929
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AA seq
954 aa
AA seq
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MTELLQSLSTQNEFVARHNGPNKSDKQKMLEAINAVSLDSLIDETVPAQIRLEQPMSLAE
AKSEADMLAAMRKFADQNQVKRTFIGQGYYNTFTPNVILRNVMENPGWYTAYTPYQPEIS
QGRLEALLNYQQMVMDLTGMEIANASLLDEATAAAEAMTLCKRAGKSKSNVFFVADDVHP
QTIEVVKTRAKFIGFEVLVGSLESLPEQDVFGALVQYPSTTGEVRDLTDIIAKAQANKTL
VTVATDLLASTLLKPAGEMGADVAIGSAQRFGVPMGYGGPHAAFMATRDKHKRTMPGRVI
GVSIDTNGNQALRMAMQTREQHIRREKATSNICTAQALLANMASFYAVYHGAEGLRTIAR
RTHHMTAILAAGLTKGGFELAHNSFFDTITINTGAQTEDLYAKALAADINLRKLGTQLGV
SFDETTTVADVEALFAVFGVKEEVAALSTEIAGNEFAAIPEALRRTTEYLTHPVFNTHHS
ETQMMRYLKQLENKDFSLTHGMIPLGSCTMKLNAAAEMIPVTWPEFGSIHPFAPAEQAAG
YAALAKDLKEKLCEITGYDAFSLQPNSGASGEYAGLIAIQRYHESRGEGHRNVCLIPSSA
HGTNPATASMVSMKVVVVKCDEEGNIDIDDLAAKIEKHKDNLSSIMITYPSTHGVYEEKV
KEVCEMVHSAGGQVYLDGANMNAQVGLTSPGFIGSDVSHLNLHKTFCIPHGGGGPGMGPI
GVKSHLAPFLPGHIEDGVEGADFAVSAADMGSASILPISWAYIAMMGEAGLTDATKVAIL
NANYVMETLRQHYPVLYRGKNGRVAHECIIDIRPLKEETGISEEDIAKRLMDYGFHAPTM
SFPVAGTLMVEPTESEDLEELDRFCDAMIAIREEMEKVKNGEWPLDNNPLVNAPHTQVDL
SAEDWDRPYSREIGCFPSKATKSWKYWPTVNRVDNVYGDRNLICSCPSIDNYED
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atgactgaattacttcaaagcctcagcacacaaaacgagttcgttgctcgccacaatgga
ccaaacaaatctgacaaacagaaaatgttggaagcgatcaacgcagttagcctagattcg
cttatcgacgaaaccgtaccagcacaaattcgcctagagcaaccaatgagcttggcagaa
gcgaaaagcgaagcagacatgctggcagcaatgcgtaagttcgccgatcagaaccaagtt
aaacgtacattcattggtcagggttactacaacaccttcacgccgaacgtgattctacgc
aacgtgatggaaaacccgggctggtacactgcttacaccccttaccaaccagagatctca
caaggtcgtttagaagcacttctaaactaccaacaaatggtgatggatcttactggtatg
gaaatcgcgaacgcgtcattgctcgatgaagcaacggcagcagcagaagcgatgacactt
tgtaagcgtgcgggtaaaagcaagagcaacgtattcttcgttgctgacgacgttcaccca
caaaccatcgaagtggtaaaaactcgtgcgaaattcatcggctttgaagtcttggttggt
tctttagaatcactaccagagcaagacgtgttcggtgcactagttcaatacccaagtaca
acaggtgaagttcgtgacctaacggacatcatcgctaaagcgcaagcaaacaaaacacta
gtgactgtagcaacggaccttcttgcttctaccctacttaaacctgcaggtgaaatgggc
gcagacgtagcaatcggttcagcacaacgttttggcgtgccgatgggttacggcggtcca
cacgctgctttcatggcaactcgtgataagcacaagcgtacaatgcctggtcgtgttatc
ggtgtttctatcgataccaacggtaaccaagcactgcgtatggcaatgcaaacgcgtgaa
cagcacatccgtcgtgaaaaagcgacttcaaacatctgtactgctcaagcactgctagcg
aacatggcgtctttctacgcggtttaccacggcgcagaaggtctacgcacgattgctcgt
cgtacgcaccacatgacagccatcctagccgctggcctaactaaaggcggcttcgagctt
gctcacaacagcttcttcgacaccatcactatcaacacaggtgcacaaactgaagaccta
tacgcgaaagcactagccgcagacatcaacctacgtaagttgggtactcagctaggtgtg
agcttcgacgaaaccacaaccgtggcagatgtagaagccctattcgcagtattcggtgtg
aaagaagaagtcgcagcactatcaactgaaatcgcaggcaacgagtttgcagccattcca
gaagcattgcgccgcacaacagaatatctcacacaccctgtgtttaacacgcaccacagc
gaaacacagatgatgcgttacctaaaacagctagagaacaaagacttctcactcacgcac
ggcatgatcccactgggcagctgtacgatgaagctgaacgcagcagcagagatgattcca
gtaacttggcctgagtttggttcgatccacccgttcgcaccagcagaacaagcagctggt
tacgcagcactcgcaaaagatcttaaagaaaagctatgtgaaatcactggctatgacgca
ttctcactgcaaccaaactctggtgcatcgggtgagtacgcaggtcttatcgcgattcaa
cgctaccacgaaagccgtggcgaaggtcaccgcaacgtatgtttgatcccaagctctgca
cacggtactaaccctgcgacagcatctatggtgtcaatgaaagtggttgtggttaagtgt
gatgaagaaggcaacatcgacatcgacgacctagcagcgaaaatcgagaaacacaaagac
aacctatcaagcattatgatcacttacccttctacgcacggcgtttacgaagagaaagtg
aaagaagtgtgtgaaatggttcattccgcaggtggtcaggtttacctagacggcgctaac
atgaacgcgcaggttggtctaacatcaccaggcttcatcggttcagacgtttctcaccta
aacctacacaaaaccttctgcatcccgcacggtggtggcggtccgggtatgggtcctatc
ggtgtgaaatctcacctagctcctttcctaccagggcatattgaagacggtgtagaaggc
gcagatttcgcagtatcagcagcagatatgggtagcgcttctatcctacctatctcttgg
gcttacatcgcaatgatgggcgaagctggcctaacagatgctacaaaagtagcaattctg
aacgcaaactacgtgatggaaacacttcgccaacactaccctgttctttaccgtggcaaa
aatggccgcgtagcgcacgaatgtattatcgacattcgtccgctgaaagaagaaacaggt
atcagcgaagaagacatcgcgaaacgtctaatggactacggtttccacgcaccaactatg
tcgttccctgtagcgggcacgctaatggttgagccaacggaatcggaagatctagaagag
ctggaccgcttctgtgatgcgatgatcgctatccgcgaagaaatggagaaagtgaaaaac
ggtgaatggccactggataacaacccacttgttaacgcgccacacacacaagttgatctt
tcagctgaagattgggaccgcccttactctcgcgagattggctgcttcccgtctaaagcg
accaaatcttggaagtactggccaacggtaaatcgcgtggataacgtatacggcgaccgt
aacctaatctgttcatgcccaagcatcgataactacgaagattaa
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