KEGG   Vibrio neocaledonicus: D3H41_18825
Entry
D3H41_18825       CDS       T06228                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
vnl  Vibrio neocaledonicus
Pathway
vnl03030  DNA replication
vnl03430  Mismatch repair
vnl03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:vnl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    D3H41_18825
   03430 Mismatch repair
    D3H41_18825
   03440 Homologous recombination
    D3H41_18825
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vnl03032]
    D3H41_18825
   03400 DNA repair and recombination proteins [BR:vnl03400]
    D3H41_18825
Enzymes [BR:vnl01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     D3H41_18825
DNA replication proteins [BR:vnl03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     D3H41_18825
DNA repair and recombination proteins [BR:vnl03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     D3H41_18825
SSDB
Motif
Pfam: RNase_T Rv2179c-like RNase_H_2 DNA_pol_A_exo1
Other DBs
NCBI-ProteinID: QCO88078
LinkDB
Position
2:424573..425217
AA seq 214 aa
MRNITQLENFMPQANSVVVLDFETTGLSPTLGDRAIEIGAVKLVNGEVVDSFQQLMNPGF
RVSSFIENYTGITNNMLRSVPSCEEVMASFSEFIAGENLIAHNASFDKRFLDAELERINC
GYSGEFACSLLVARRLIQEAPSHKLGELVRYKNIDNDGVFHRALADAQMTAKLWLLMVKG
IENSGIEKPSFQLMQTVSKTAKGKVDLLLVKSRA
NT seq 645 nt   +upstreamnt  +downstreamnt
ttgcgcaatattactcagctggaaaattttatgcctcaagcaaactctgtggtcgtactc
gactttgaaaccacaggtctctctcctactttaggtgatcgcgcaatagaaattggtgca
gtaaagttagtcaatggcgaggttgtcgatagttttcagcaactcatgaatcccggtttc
agagtgagttctttcattgagaactacaccggcattaccaacaatatgttgcgatcggta
ccaagctgcgaagaggtaatggcgtcatttagtgagttcattgctggcgagaaccttatc
gctcacaacgcgtccttcgataaacgatttttagatgcagagcttgaacgaatcaactgt
ggttattcgggtgagtttgcttgctctttactggtagcaagacggctcattcaagaagcc
ccatcacataagctaggtgaacttgttcgctataaaaatatcgacaacgacggtgttttc
caccgtgcactagccgatgcgcaaatgacagccaagctttggctcttaatggtcaaaggg
atagaaaactcaggcatcgaaaaaccaagttttcagttgatgcaaacagttagtaaaaca
gccaaaggaaaagtcgacctgctactcgtcaaaagccgtgcgtaa

DBGET integrated database retrieval system