KEGG   Vibrio neocaledonicus: D3H41_19220
Entry
D3H41_19220       CDS       T06228                                 
Name
(GenBank) DNA helicase IV
  KO
K03658  DNA helicase IV [EC:5.6.2.4]
Organism
vnl  Vibrio neocaledonicus
Brite
KEGG Orthology (KO) [BR:vnl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vnl03400]
    D3H41_19220
Enzymes [BR:vnl01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     D3H41_19220
DNA repair and recombination proteins [BR:vnl03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    D3H41_19220
SSDB
Motif
Pfam: Helicase_IV_N UvrD-helicase AAA_19 UvrD_C UvrD_C_2 AAA_12 AAA_30 Viral_helicase1 GH97_N ResIII Death_3
Other DBs
NCBI-ProteinID: QCO88148
LinkDB
Position
2:complement(510120..512189)
AA seq 689 aa
MQLTATSKAQFFIQNEYHHVEIKENSVLLSSIGSEEHIPFTIWNGKVSVKRGLLWSSLQF
FAHEHEGKQQSWLVQGLPWPQCRKFALEAVRQYQEWHNTQCRKLAEYLPKWEEELYKLKH
LPAYLSHSQVVSWVESLNQELSEMKTTLEEAKMRMPNRMSQIEPWLIDTSEALGERNRDW
LEAERPNWEVLFNQIESSPLNLSQQYAVLLNDDHNLVLAGAGSGKTSVLTARVAYLLQSH
QAQAEELLMLAFGRDAATEMKERLVDKVGMAADGVRVNTFHQLGLYILKQVEQQPVEISP
LALDENQRTAWCVDWLKKHWMTPTNFKRWQKHLDKWPIAYLKGDDELGSHSENPKLIAWL
DSQLSHLAAVGLTKKQVQEKLVNHQDYTRLNSELALCWPCFTAWQKMLKESNQVDFPTMI
SRATDYVNKGKFVSPWRFIMVDEYQDISPDRLALIEALCESTQKQAGATLFAVGDDWQAI
YQFAGADVDLITGFKERFAHSTVHHLDTTYRFNNQIGDVANTFVQQNPSQLPKTLNSHKQ
RKQKSVHTAPSNQVEKILDHLNQQAKQTKSVLLLGRNHYHKPDLFDDWLRRFPNLDIRFM
TCHASKGREADFVIILSVDEGQFPAKKKQIHIDGALTESKDKFPYAEERRLFYVAITRAK
EKVWITHTGAGSAFVQELVNGDYPIVTSR
NT seq 2070 nt   +upstreamnt  +downstreamnt
atgcagctcactgccactagcaaagcacagttttttattcaaaatgagtaccatcacgtc
gaaataaaagagaacagtgttttattaagctcgataggcagtgaagaacatattcctttt
acgatctggaatggcaaagttagcgtaaagcgtgggttattatggagctctttacagttt
tttgctcatgaacacgaaggcaaacaacaaagctggctagtccaaggtttaccgtggcca
caatgccgaaagttcgcgcttgaggccgttcgtcaatatcaagagtggcacaacactcag
tgccgaaaactggctgagtatctacctaagtgggaagaagagctttacaaactaaagcac
ttgcctgcttacttatcgcattctcaagtggtctcctgggttgaaagccttaaccaagag
ttaagcgagatgaaaaccaccctagaagaagccaaaatgcgaatgccgaatcgtatgtcg
caaatagagccttggctcattgatacctctgaggcgcttggtgagcgtaatcgcgattgg
ctagaagcagaacgtccaaattgggaagtgctgtttaatcaaattgaatcctctcctttg
aatttatcccagcaatatgcggtattactcaacgacgaccacaacttagttcttgctggt
gccggctcgggcaaaaccagcgttttaaccgcacgagttgcctatttgttgcaaagccat
caggctcaagcagaagagcttctcatgttagcgttcggtcgtgatgcggcgactgaaatg
aaagaacgcttagtagataaagtgggcatggcggcagacggtgtgcgcgtcaacacattc
catcagttgggcttgtatattcttaaacaagtcgaacagcaacctgtcgaaattagccct
ttagcgttggacgaaaatcaacgaacggcatggtgtgtagactggttgaaaaaacattgg
atgacacccaccaactttaaacgttggcaaaaacatttagacaaatggccgattgcgtac
ctaaaaggggatgatgagttaggaagccattcagaaaatccaaaactgatcgcttggcta
gattcgcagctgtctcatttagcggcggtagggttgaccaaaaagcaagtacaagaaaag
ctcgtaaaccaccaagactatacgcgtttaaatagtgaactcgccttatgctggccatgt
tttacagcgtggcagaaaatgcttaaagaaagcaaccaagtggatttcccaaccatgatc
agtcgtgcgacagattatgtgaataaagggaagtttgtctcgccatggcgctttattatg
gtcgatgagtatcaagatatctctccagatcgtctggcattgattgaagcactgtgtgaa
tccactcagaaacaagcaggtgccacgttatttgctgttggcgacgattggcaagcgatc
tatcagtttgcaggagcggatgtcgatcttatcactggctttaaagaacgctttgctcac
tctaccgttcatcacttagatacaacttatcgtttcaacaatcagattggtgatgtagcg
aatacattcgtgcagcaaaacccatcgcagttgccgaaaacactaaacagccacaaacaa
cgcaagcagaagagcgtacataccgcgccgagcaatcaagtggaaaagatcttggatcac
ttgaatcaacaagccaagcaaaccaagtcagttttattgctaggacgtaaccattatcat
aagcccgatttgttcgacgattggttgcgacgtttccctaatctcgatattcgctttatg
acttgccatgcgagtaaaggacgcgaagctgactttgtgattattctttctgtggatgag
gggcaattccccgctaagaagaagcaaattcacattgatggtgcgttgacggagtccaaa
gacaaattcccttacgcagaagagcgcaggctattttacgtggcgattacacgtgcgaaa
gagaaggtttggattacgcatactggtgcgggatctgcattcgttcaagagctcgttaat
ggtgactatcccatcgtgacttctcgttaa

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