Vibrio neocaledonicus: D3H41_19540
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Entry
D3H41_19540 CDS
T06228
Name
(GenBank) hydroxymethylglutaryl-CoA lyase
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
vnl
Vibrio neocaledonicus
Pathway
vnl00280
Valine, leucine and isoleucine degradation
vnl00650
Butanoate metabolism
vnl00907
Pinene, camphor and geraniol degradation
vnl01100
Metabolic pathways
vnl01120
Microbial metabolism in diverse environments
vnl04146
Peroxisome
Module
vnl_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
vnl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
D3H41_19540
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
D3H41_19540
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
D3H41_19540
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
D3H41_19540
Enzymes [BR:
vnl01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
D3H41_19540
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GFIT
Motif
Pfam:
HMGL-like
Motif
Other DBs
NCBI-ProteinID:
QCO88211
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Position
2:596564..597466
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AA seq
300 aa
AA seq
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MLPAKVNIVEVGARDGLQNETSVTLVDKIRLINQLSSSGLKHIEAGSFVSPRWVPQMADS
DQVFAGISKKPDVVYSALTPNLAGLERALESGVKRIAVFGSASETFSQKNINCSIAESLA
RFEPVIELANQHNIPVRGYLSCTMVCPYEGVIKPEQTTKVANTLFDMGCYEISLGDTVGK
ATPNRVIAMLDSLLTLLPKDALAVHFHDTYGQALANIYQALLMGINTIDSAVAGLGGCPY
AKGASGNVATEDVLYLCEQLGIKTGVDLGVINEAGWQICRALGKSPASRVALALGDPYSL
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgctaccagcgaaggttaatatcgtcgaagtcggcgctcgtgatggtttacaaaatgaa
acgtcagtgacgctggttgataaaatccgtttgattaaccaactaagcagcagtggctta
aagcatattgaggcgggatctttcgtctctccaaggtgggtgcctcaaatggccgattcc
gatcaggtgtttgctggtatctcaaaaaagcctgacgtggtttatagcgcgctcacacca
aatctcgcagggttagaacgtgcgctggaaagcggtgtaaagcgaattgcggtgtttggc
tccgcttcagaaacgttcagccagaagaacatcaactgcagcattgcggagagccttgcc
cgttttgaacccgttatcgaattggcgaaccagcacaacatacctgtgcgcgggtacttg
tcttgtaccatggtgtgtccatatgagggagtaatcaagccagagcaaactaccaaggtc
gccaatacgttgtttgatatgggatgttatgagatttcgctcggtgatactgtcggtaaa
gcaacacctaatcgcgttatcgccatgctggattcgttgttaacgctactgccaaaagac
gcgctcgcagtacattttcatgacacttatggacaagcattagccaatatctaccaagcc
ttgttaatgggcatcaacaccattgatagcgcagtagcggggctcggcggctgcccttac
gcgaaaggagccagtggcaatgttgcaacggaagatgtactttatctgtgtgagcaactt
gggattaaaacaggcgttgaccttggcgtcatcaatgaagcgggttggcaaatttgccgt
gcgttaggaaagtctcctgcttctagggtcgcattagctctgggcgatccgtatagcttg
taa
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