Vibrio neocaledonicus: D3H41_20090
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Entry
D3H41_20090 CDS
T06228
Name
(GenBank) OmpA family protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
vnl
Vibrio neocaledonicus
Brite
KEGG Orthology (KO) [BR:
vnl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vnl02000
]
D3H41_20090
Transporters [BR:
vnl02000
]
Other transporters
Pores ion channels [TC:
1
]
D3H41_20090
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Ortholog
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GFIT
Motif
Pfam:
OmpA
OMP_b-brl
OmpA_membrane
DUF748
BBP2_2
DUF3187
Motif
Other DBs
NCBI-ProteinID:
QCO88313
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Position
2:747865..748857
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AA seq
330 aa
AA seq
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MNKVAIAVAAVVAGSSALLNSAQAEMYIGGKVGMTTLDDACYLNSPCDDEAFGAGLHIGY
DFTDIIGLEYGVDFLGDYEGNSRSGANTINTIDGNLTALTLAPKFNWHLNDSWNLFAKIG
GAYMMSDDETDFVPTGSLGAEYSIDRNWSVRAEYQRYQDMSDDVWDDMDANFFGIGVNYK
FAAAPVVAAVVTEEVIEPDPEPVMMSKVHKEEYGTGTFEFDSAKLTESVSERLDNFVSFL
NEYPQAQVEITGYTDSSGPAAYNQKLSERRAQSVADYLTAAGIGSDRLTVKGMGEENPVA
DNSTREGREKNRRVEVVVPSFEYQELVQPE
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaagtagcaattgcagtagcagcagtggtagctggtagtagcgcgcttttaaac
tctgctcaagctgaaatgtacatcgggggcaaagtgggcatgactacacttgacgacgct
tgctatctaaatagcccttgtgatgatgaagcgttcggtgcaggactacatatcggttat
gactttaccgatatcatcgggctagagtacggcgtagacttcttaggcgactatgaagga
aactctaggtcaggggctaatacgattaatacgattgacggcaatctaacggctttaaca
cttgcacctaaattcaactggcacttaaacgactcttggaatctatttgctaagatcggt
ggtgcttacatgatgtctgatgacgaaacagactttgtcccaacaggttctttgggtgct
gaatactcgatcgatagaaactggagtgttcgcgctgaataccaacgctaccaagatatg
tctgacgacgtgtgggacgacatggatgctaacttctttggtatcggtgttaactacaaa
ttcgcagcagctccagttgttgcagcagttgtaacggaagaagtgatcgagccagatcca
gaaccagtgatgatgagcaaggtgcacaaagaagagtacggtacaggtacgtttgaattc
gatagtgctaagttaacagagtccgtttctgaacgtctggacaactttgtttcattcttg
aacgaatatcctcaagctcaagtagagattactggttacacggatagctcaggccctgcg
gcatacaaccaaaaactgtctgagcgtcgtgctcaatctgttgctgattacctaaccgca
gctggcattggttcagatcgtttgacagttaaaggtatgggtgaagaaaacccagttgct
gacaacagcactcgcgaaggtcgtgagaaaaaccgtcgcgtagaagttgtggtaccttca
tttgaataccaagagctagttcaaccagaataa
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