Vibrio neocaledonicus: D3H41_20865
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Entry
D3H41_20865 CDS
T06228
Name
(GenBank) ABC transporter permease subunit
KO
K02054
putative spermidine/putrescine transport system permease protein
Organism
vnl
Vibrio neocaledonicus
Pathway
vnl02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vnl00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
D3H41_20865
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vnl02000
]
D3H41_20865
Transporters [BR:
vnl02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
D3H41_20865
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Paralog
GFIT
Motif
Pfam:
BPD_transp_1
HCV_NS2
Motif
Other DBs
NCBI-ProteinID:
QCO88457
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All DBs
Position
2:906818..907708
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AA seq
296 aa
AA seq
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MSSSVLSPSSSESRSNLASTWLKRFKPAIWLVPFALFFYLFQLAPMIWVLLNSFIYDGEF
AFDNYIEVLDSAFMMQAFGNSLWLAVWSSIFGLAIATLLVSSLRRVDSKVRDGVIAFTNM
SSNFAGVPLSFAFIIILGTNGAITLLLKQYGLLGDFDLYGKWGLLAIYIYFQIPLAVLLI
YPAFDALSDDWQAAAALLGAKTSQYWAKIALPVLSPALFGTFIILIANAIGAYASVYALT
SGNYNVITIRIASLVSGDLFLEPNLAAAISVILMALLAFITVINQWLISKSYAGRK
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgagcagttcagtcctctccccaagctccagcgaatcacgctcaaatttggcaagtact
tggttaaagcgctttaagccagccatttggttggtgcctttcgcgctgtttttctaccta
tttcaactcgcaccgatgatttgggtactgttaaacagctttatctacgatggcgagttt
gccttcgataactacattgaagtgctcgactccgcctttatgatgcaggcgtttggcaac
agtttgtggttagctgtatggtcgagcatttttggcttagccattgcgactctgttggtc
tcttctctgcgcagagtcgattctaaagtccgcgacggtgtgattgcgtttacgaacatg
agcagcaactttgcaggcgtacctctgtcattcgcttttattattattttgggcaccaac
ggggcgattacccttttgctcaagcagtatggcttactcggtgatttcgacctttatggt
aaatggggcctgctggccatttacatctacttccaaatcccgctggcggtattgttgatc
taccctgcgttcgacgcgttgagtgatgattggcaagctgctgctgcgctactgggagcc
aaaacatcacagtattgggcgaaaatcgcgctgccagtgctctcaccagccttattcggt
acctttattatcttaatagccaacgcaattggcgcttatgcgagtgtttatgcgctgacc
tccggtaactataacgtcatcacaattcgaattgcgagtctggtatcgggagacctgttc
cttgaacctaatctcgccgctgcaatttcggtgattctaatggcgttacttgcctttatc
acagtgattaaccaatggctcatttcgaaaagctatgcaggtaggaagtag
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