Vibrio neocaledonicus: D3H41_21130
Help
Entry
D3H41_21130 CDS
T06228
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K04033
AraC family transcriptional regulator, ethanolamine operon transcriptional activator
Organism
vnl
Vibrio neocaledonicus
Brite
KEGG Orthology (KO) [BR:
vnl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vnl03000
]
D3H41_21130
Transcription factors [BR:
vnl03000
]
Prokaryotic type
Helix-turn-helix
AraC family
D3H41_21130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
HTH_11
HTH_20
GntR
Motif
Other DBs
NCBI-ProteinID:
QCO88505
LinkDB
All DBs
Position
2:959883..960833
Genome browser
AA seq
316 aa
AA seq
DB search
MSNQMPQTAPMLCIHHTKDANQQAASLINWQQEYDQLSDGRFLGQIRERRFPNFHVFRED
SNRSLRQQCRVEEGGIWLGLSAENKPLHLNHSQFNSSQLLLRQGGADFELMTPEQFSIYG
IVLDKNFVHIIENQLELGSIQNNTLHLTGLTEKHIQQLKYYLGMLLGSAEPRWSETTHQA
ILKDIVLELFSLSSLHTSHPISISHRQHVMHRIKQQLQDLDYRTPITVSELCDAVHVSRR
TLQYTFEHCCNTSPKQFIHRMRLNQVRRVLQSPEDNRTIAEIAFDFGFFHLGQFSQSYKR
LFGETPTETRKWESSK
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaccaaatgccccaaactgcaccaatgctgtgcatccatcacactaaggatgca
aaccaacaagctgcgagtctgataaactggcaacaggaatatgaccaactcagcgatggt
cgatttttaggtcaaattcgagaacgacgatttcccaatttccatgtatttcgtgaagac
agtaaccgctcgctaagacagcaatgcagggttgaagagggaggtatttggttgggtttg
agtgcggaaaataagccgctacacctaaatcacagtcagtttaattcaagccaacttttg
cttaggcaaggtggcgctgattttgagttaatgacaccggagcagttttctatctatgga
atagtgctcgacaaaaacttcgttcacatcatagaaaatcaacttgagcttgggagtatc
caaaacaacacattacacttaacgggtttgacggaaaaacacattcaacaacttaaatac
tacttaggcatgttacttggttccgccgaaccaagatggtctgaaaccacacatcaagca
atattaaaagatattgtgctggagctgttctcactcagttcactgcacacgagccatccg
atatcaatctctcatcgtcaacacgtgatgcaccgtataaaacaacagctacaggatcta
gactaccgtacaccgataaccgtcagtgaactgtgtgatgcagtacacgtcagtcgtcgc
acactacagtacacctttgaacattgctgtaatacttccccaaagcagttcatacatcga
atgcgcctgaatcaagtacgtagagtgctacaaagccctgaagataatcgaacaattgca
gaaatcgcttttgactttggttttttccatctcgggcagttcagtcaaagctacaagcgg
ctatttggtgagacaccaactgaaacgagaaaatgggagtccagcaaataa
DBGET
integrated database retrieval system
