Vibrio neocaledonicus: D3H41_22100
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Entry
D3H41_22100 CDS
T06228
Name
(GenBank) CdaR family transcriptional regulator
KO
K02647
carbohydrate diacid regulator
Organism
vnl
Vibrio neocaledonicus
Brite
KEGG Orthology (KO) [BR:
vnl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vnl03000
]
D3H41_22100
Transcription factors [BR:
vnl03000
]
Prokaryotic type
Helix-turn-helix
Other families
D3H41_22100
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GFIT
Motif
Pfam:
Diacid_rec
HTH_30
GGDEF_2
HTH_8
Phage_NinH
Motif
Other DBs
NCBI-ProteinID:
QCO88684
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Position
2:complement(1148598..1149740)
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AA seq
380 aa
AA seq
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MVILDHALAQQIVDRTMSIIGQNVNVMNSAGIIIGSGDPKRVGQVHDGAVLALNHGDSLE
LNEQQCLTLQGVKPGINMLLKLHGDVVGIVGVTGEPEKIRDFAKLVKMTAELTIEQAALV
EKFQWDRRHREEFILAWINGKLTDEELKDWAMRLSIDVTQPRVATVIEVSTPSASKSMKS
VRNIVELLEYPERNNLVAIVSVNEIVVLKPCHSAKQWDSQVESERIDKLMSRLSDHDSHT
FHIALGQLFNEPKDVALSYQSAKQVLAIGKQFYPEKRKYLFDELRLPVLLAPLADIWQGE
QIIDGVKRLKEKDKSGQLLKTLDALFECNGNVTECSKMLFIHRNTLRYRLEKITEITGLP
TTNFVGLAELYIATRLSKMS
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atggtgattctcgaccacgctttagcacaacaaattgttgatcgaaccatgtccatcatt
ggtcaaaatgtgaatgtgatgaactcggcaggcatcatcattggcagtggcgaccctaaa
cgtgttgggcaagtgcatgatggcgcggtactggcgctgaatcatggcgattcgctagag
cttaatgagcagcaatgtttgacgttgcagggtgtcaaacccggtatcaatatgttgttg
aaattacatggcgacgtggtcggtattgttggcgtcacaggcgagccggagaaaatccga
gattttgcaaaactggttaaaatgaccgctgaactgacaatcgagcaagccgcgctggtg
gaaaaatttcagtgggacagacgtcatcgcgaagagtttattctggcttggatcaatggg
aaattgaccgatgaagagctgaaagattgggcgatgcgtctttctatcgatgttactcaa
ccacgggtggcaacggtgattgaagtctcgacgccgtccgcctcgaaaagcatgaagagt
gtgcgcaatattgttgagctgcttgaatacccagagcgtaacaacctggttgcgattgtc
tcagtgaatgaaattgtggtgttgaaaccgtgtcattccgccaagcagtgggatagccaa
gttgaaagtgagcgcattgataagttgatgtcgcgtttaagcgatcacgattcgcatacg
tttcacattgcgctagggcagctgtttaatgaacctaaagatgtcgcgttgtcataccaa
agtgcgaagcaggtattagctattggcaagcagttctacccagagaaacgtaagtacctg
ttcgatgaacttcgtttgcctgttttgttagcgccgttggcggatatttggcaaggtgaa
caaattattgatggtgtgaaacggttgaaagagaaagacaaatctgggcaattattgaaa
accctagatgcactgtttgaatgcaatggcaatgtaacagaatgctctaaaatgctgttt
attcaccggaacactctgcgctatcggttagagaaaatcaccgagataacagggctacca
acaaccaattttgtggggttagcggagctttatattgcgactcggctctcaaaaatgtcg
tga
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