Vibrio neocaledonicus: D3H41_22680
Help
Entry
D3H41_22680 CDS
T06228
Name
(GenBank) winged helix-turn-helix transcriptional regulator
KO
K03719
Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
Organism
vnl
Vibrio neocaledonicus
Brite
KEGG Orthology (KO) [BR:
vnl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vnl03000
]
D3H41_22680
03036 Chromosome and associated proteins [BR:
vnl03036
]
D3H41_22680
Transcription factors [BR:
vnl03000
]
Prokaryotic type
Helix-turn-helix
Lrp/AsnC family
D3H41_22680
Chromosome and associated proteins [BR:
vnl03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
D3H41_22680
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AsnC_trans_reg
HTH_24
HTH_AsnC-type
MarR
MarR_2
HTH_34
E3_UFM1_ligase
Fe_dep_repress
DDRGK
FliE
LexA_DNA_bind
HTH_Crp_2
Motif
Other DBs
NCBI-ProteinID:
QCO88793
LinkDB
All DBs
Position
2:1269132..1269608
Genome browser
AA seq
158 aa
AA seq
DB search
MSYQLDRIDLHILRVLHSRGRIPVVELAKLINLTTSPCSDRVKRLEKEGYINGYHAELNA
EKLGLDVQVFIHIRLDQTSFSIFEKFAKAVELMPEIEECYSLSGDFDTMIKVRVKSMKAY
QEFMSSKLGTLPGVIQTRSEVVIEEHKTGFGVNPELLG
NT seq
477 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcaattggaccggattgatttacatattttgagagtgcttcattcgagaggc
agaattccagttgtagaactagcaaagctgattaacttaacgacttctccatgttctgac
cgtgtaaagcgactagaaaaagaagggtatatcaatggttaccatgcagagttgaatgcg
gaaaagttggggctggatgtgcaagtattcatccatattcgtttagaccaaaccagtttt
tctatttttgaaaagtttgcgaaagcggtggaattgatgcctgaaattgaagagtgctac
tcgctctctggagatttcgataccatgataaaagttcgtgttaagagcatgaaagcgtat
caggagtttatgtcgagcaagttaggcacgcttccgggcgtgattcaaactcgtagtgaa
gtggtcattgaagaacataaaacgggatttggcgtgaaccctgagctccttggttag
DBGET
integrated database retrieval system
