Vibrio neocaledonicus: D3H41_23945
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Entry
D3H41_23945 CDS
T06228
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
vnl
Vibrio neocaledonicus
Brite
KEGG Orthology (KO) [BR:
vnl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vnl03400
]
D3H41_23945
Enzymes [BR:
vnl01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
D3H41_23945
DNA repair and recombination proteins [BR:
vnl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
D3H41_23945
Prokaryotic type
D3H41_23945
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
QCO89030
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Position
2:1550335..1551750
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AA seq
471 aa
AA seq
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MILVWFRRDLRTLDHTALKAALDSGQPVVACFIATPEQWREHHMAPMQADLIARRLACLN
EELESLNIPFLYKEVPSFSDCTDVISGWAETLEATSVMANIHYEVNERELDTQVSEALAS
HDIEFELFHDKCVHAPTTVLNKQGEYFKVFTPFKRAWLTQFHMPTVVKPHEQAPLNKKVL
EQIESARFNSSFTFSYARESSEDWLASTNDILMQLREFARERSDAYQSERDFPAIDGTSQ
LSPYLAIGALSPRQCIARLYAENQQNDLTEGKATWLSEIIWREFYQHLLVFEPKLVKGKG
FIDWEDKIQWSYDEKAFERWKTGITGYPIVDAAMRQLNQTGWMHNRLRMIVASFLTKDLH
IDWRWGEAYFMSKLVDGDFAANNGGWQWSASTGCDGQPYFRIFNPISQGEKFDANGEFVR
HWVPEIKSVPNKYIHKPWTWEGFSLLEYHKPMVDHKTEREITLQLFKSAKE
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgattttagtatggtttcgacgtgacttgcgtacgttagaccacacggcactcaaagcg
gcattggattcaggtcagcctgtcgtcgcttgctttatcgcgacgccagagcagtggcgg
gagcatcacatggcgccgatgcaggcagacctcattgctcgtcgcttagcttgtcttaac
gaggagcttgaaagccttaatattccctttttgtacaaagaggtaccgtcgttttccgat
tgtacagatgtgattagtgggtgggcggaaacacttgaagccacgtctgtcatggcaaac
attcactatgaggtgaacgaacgagagctcgatacacaagtaagtgaagcgttagcttct
cacgatatcgaatttgaactgtttcatgacaaatgtgtgcacgcgccaacgacggttctt
aataagcaaggcgaatattttaaggtgtttacgccattcaagcgtgcttggttaacgcag
ttccatatgccgacggtagtaaaacctcacgagcaagcgccactcaataaaaaggtactc
gaacaaatagagtcggctcgatttaattcaagcttcacatttagctatgctcgagaatcc
agtgaagactggctggcttcgactaatgatattttgatgcagcttagggaatttgcacgg
gagcgcagtgacgcgtatcaaagcgagcgagactttccagctattgatggcactagccaa
ctgtctccataccttgcgattggcgcgctatcaccaaggcagtgtattgctcgtttgtat
gctgaaaatcaacaaaatgaccttacagaagggaaagcaacttggttaagtgagatcatt
tggcgtgagttttatcagcacctattggttttcgaaccaaaactcgtcaaaggcaaagga
tttatcgattgggaggataaaatccagtggtcctatgatgagaaagcctttgagcgatgg
aagacaggaataacaggatacccaatcgttgatgcagcaatgcgtcagctcaatcaaaca
ggctggatgcacaaccgattacgtatgattgtcgcgagctttcttaccaaggacttacat
attgattggcgatggggagaagcgtacttcatgagtaagctggtggacggcgattttgca
gcgaacaatggtggctggcaatggtctgcctctacgggctgtgacgggcagccatacttt
cgtattttcaacccgataagccaaggcgaaaagttcgatgctaatggtgaatttgtgcgc
cactgggtaccagaaatcaaaagtgtaccgaacaaatacatccataaaccttggacttgg
gagggcttttctttactggaatatcacaagccgatggttgatcacaagacagaaagagag
ataaccttacagctctttaaaagtgccaaggaatag
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