Vibrio neocaledonicus: D3H41_24515
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Entry
D3H41_24515 CDS
T06228
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
vnl
Vibrio neocaledonicus
Pathway
vnl02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vnl00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
D3H41_24515
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vnl02000
]
D3H41_24515
Transporters [BR:
vnl02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
D3H41_24515
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
QCO89137
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All DBs
Position
2:1678191..1679705
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AA seq
504 aa
AA seq
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MHLSTPKLALSLALSALLTGCFDSGESKPEAEKAAAPQATEIRVAMMQPPRTGLSPLSDD
AFKLSRWSTAETLVNLNDQSVAEPMLATEWEQVDPMTWQFKVRKGVKFHDGSDLDANAVV
NSLQKALDAAPKPRILDGIEWQVRALDDFTVEIKTTFNDPLLPSRLSSPQLAILSGAAYQ
ENGRVVPINAGTGPFVLTEINGTTSAKLKRFDGYWGEKAKVDSIFAEYVPNGFARAAALR
TGEADVVEAVPVSQIAMMESSQLHEVAMPRTNTLYLNNKSDVFSQFGLRKAAAQAVNREQ
IIKTVYENHADSAKGLLGPALAWAQPIRDANPRMETMEMRHANGEKITIGTFTDRAELPE
VAVLLKQQLEAAGFVVELDVREYAQIENDALAGKFDAFLLSRATVLDSGDPVAYMQSDFS
CKGSYNLGQFCSEEVDAALKHADRQPLGEKRQQAIIEAESKILEQYAVIPLLHERVIQGE
SDRVKNAQRDPRERRLIDQFTEVN
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgcaccttagtactcccaagttagctttgtcgctggctttaagcgcactgctgacgggt
tgttttgactctggcgaaagcaagccagaagcggaaaaagcagctgcaccgcaagcaacg
gaaattcgcgttgccatgatgcaaccaccacgcacaggtttgtcaccactttcagatgac
gcgttcaaactgtcacgttggagcacagcagagacgctagtaaacctaaacgatcagtcg
gtagcagagcctatgctggcaacagagtgggaacaagttgacccgatgacgtggcaattt
aaggtacgtaaaggcgtgaaattccacgatggttctgaccttgatgccaatgcggttgtg
aattctctacaaaaagcattagatgccgcaccaaagccacgcattttggatggtatcgaa
tggcaagttcgcgcattggacgacttcactgttgaaatcaaaacgacctttaacgatcca
ttgttgccaagccgtctatctagcccacagctagcgatcctttctggtgctgcatatcaa
gaaaacggtcgtgttgtgccaatcaatgcgggtacgggtccattcgttctgacagaaatc
aacgggacaaccagcgcaaaactgaagcgttttgacggttactggggtgaaaaagcgaaa
gtagacagcatcttcgctgaatacgtaccaaacggttttgctcgtgctgcagcgctgcgt
accggtgaggcggatgtcgttgaagcggttcctgtatcgcaaatcgcgatgatggaatct
tcacaactgcacgaagtcgcaatgccacgtaccaacacgctttacctaaacaacaaatca
gatgtgtttagccagttcggtttgcgtaaagcagcagctcaagcggttaaccgtgagcaa
atcatcaaaacggtttacgagaatcacgccgattcagcaaaaggtctgttaggtcctgca
ttggcatgggctcaaccaattcgtgatgcgaaccctcgtatggaaaccatggaaatgcgc
cacgcgaacggtgagaagatcaccatcggtacatttaccgaccgtgctgagttgccagaa
gtagcggtgctgctaaagcaacaacttgaagcggctggctttgtggttgaactagacgtt
cgtgaatatgcacaaatcgaaaacgatgctctagcaggtaagttcgatgcgttcttgttg
tcacgtgcaacggtgctggattctggtgatccagtcgcgtacatgcaaagtgactttagc
tgtaaaggttcttacaacttaggtcagttctgctctgaagaagtggacgcagcattgaaa
cacgctgatcgtcaacctttgggtgagaaacgccaacaagcgatcatcgaagcagaaagc
aaaattcttgagcaatacgctgtgattccactgcttcacgagcgtgtaatccaaggtgag
agtgatcgcgtgaagaatgcacaacgtgacccacgtgagcgtcgcctgatcgaccagttt
actgaggtgaactaa
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