Vibrio neptunius: KW548_00860
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Entry
KW548_00860 CDS
T08906
Name
(GenBank) PadR family transcriptional regulator
KO
K10917
PadR family transcriptional regulator, regulatory protein AphA
Organism
vnp
Vibrio neptunius
Pathway
vnp02024
Quorum sensing
vnp05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vnp00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
KW548_00860
05111 Biofilm formation - Vibrio cholerae
KW548_00860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vnp03000
]
KW548_00860
Transcription factors [BR:
vnp03000
]
Prokaryotic type
Helix-turn-helix
PadR family
KW548_00860
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Gene cluster
GFIT
Motif
Pfam:
Vir_act_alpha_C
PadR
HTH_34
MA3
Motif
Other DBs
NCBI-ProteinID:
QXX06737
LinkDB
All DBs
Position
1:185154..185693
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AA seq
179 aa
AA seq
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MSLPHVILTVLSTRDATGYDITKEFSATIGYFWKASHQQVYRELNKMAQNELVTCVLEPQ
EGKPDRKVYSITDSGRVALGEWFDQPTAHPTVRDEFCAKLMACAVQPSAPYREQLAELVE
ESRKLVAHYQEIENAYYSTPSTLDKQQRLERLTLRRNLLVRQAWVEWADEVLHELSSLG
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
atgtcattaccacacgttatcctgacagttctgagcacacgcgacgcaactggatatgat
atcaccaaagaattttctgccactattggctacttttggaaagcaagccaccaacaagtc
tatcgcgagctcaataaaatggctcaaaatgagttggttacctgcgttctagaacctcaa
gaaggtaaaccagaccgtaaagtatattccatcacagactctggtcgcgtcgcactgggc
gaatggtttgatcaaccaacagcacatccgaccgttcgtgatgaattctgtgcgaaattg
atggcttgtgctgttcaaccttccgcaccttaccgtgaacaactcgctgaacttgtagaa
gaatcgcgcaagttggttgctcactatcaggaaatagagaacgcgtattattcgacgccc
tctaccctggacaaacaacagcgtttagaacgtttaacactccgtcgtaatctactagtc
cgccaagcgtgggtagaatgggctgatgaagtactccatgaattatcctctctaggctaa
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