Vibrio neptunius: KW548_02100
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Entry
KW548_02100 CDS
T08906
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
vnp
Vibrio neptunius
Pathway
vnp00071
Fatty acid degradation
vnp00280
Valine, leucine and isoleucine degradation
vnp00310
Lysine degradation
vnp00362
Benzoate degradation
vnp00380
Tryptophan metabolism
vnp00410
beta-Alanine metabolism
vnp00640
Propanoate metabolism
vnp00650
Butanoate metabolism
vnp00907
Pinene, camphor and geraniol degradation
vnp00930
Caprolactam degradation
vnp01100
Metabolic pathways
vnp01110
Biosynthesis of secondary metabolites
vnp01120
Microbial metabolism in diverse environments
vnp01200
Carbon metabolism
vnp01212
Fatty acid metabolism
Module
vnp_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
vnp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
KW548_02100 (fadB)
00650 Butanoate metabolism
KW548_02100 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
KW548_02100 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
KW548_02100 (fadB)
00310 Lysine degradation
KW548_02100 (fadB)
00380 Tryptophan metabolism
KW548_02100 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
KW548_02100 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
KW548_02100 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
KW548_02100 (fadB)
00930 Caprolactam degradation
KW548_02100 (fadB)
Enzymes [BR:
vnp01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
KW548_02100 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
KW548_02100 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
KW548_02100 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
KW548_02100 (fadB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
QXX06934
LinkDB
All DBs
Position
1:complement(434499..436670)
Genome browser
AA seq
723 aa
AA seq
DB search
MIYQAETLQVKELHDGIAELSFCSPNSVNKLDLATLESLDKALDALNAYQGLKGLLLTSD
KNAFIVGADITEFLGLFAKEEAELDKWLQFANSIFNKLEDLPVPTISVLKGHTLGGGCEC
VLATDMRIGDKTTSIGLPETKLGIMPGFGGCVRLPRVIGADSAMEIITQGKACRADEALK
IGLLDAVVDSESLYESALATLKQAINEKLDWQQRRKQKTSALTLSKLEAMMSFTMAKGLV
AQKAGPHYPAPMKAVIAIEEGSRFARNEALDIERKYFIKLAKSEEAKALVGLFLNDQYIK
GIAKKAAKHANKQTERAAVLGAGIMGGGIAYQSALKGVPVMMKDIAQASLDLGMTEASKL
LNKRLSRGRIDGFKMAGILASITPSLHYAGVENSDVIVEAVVENPKVKAAVLSEVEQQVS
EDTVITSNTSTIPINLLAKSLQRPENFCGMHFFNPVHRMPLVEIIRGEHTSDETINRVVA
YAAKMGKSPIVVNDCPGFFVNRVLFPYFGGFSMLLRDGADFTKVDKIMERQFGWPMGPAY
LLDVVGIDTAHHAQEVMAKGFPERMGKSSRDAIDALFDANKYGQKNGSGFYSYSVDKRGK
PKKTFSDEVLPILSEVCSQAQEFDDQTIIQRMMIPMINEVVLCLQEGIIASPQEADMALV
YGLGFPPFRGGVFRYLDSVGIAEFVAMAEQHQGLGAMYQVPQMLIDMAAKGETFYGTQQH
GSI
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgatttaccaagccgaaaccctacaggtaaaggaattacacgacggtatcgctgagcta
agtttctgctcaccaaattctgtcaacaagctcgacctcgccactctggaatcactcgat
aaagccttggatgccctgaatgcataccaaggtctaaaaggcctgttactgacttcagat
aaaaatgccttcattgtcggcgcagatatcacagaattcttaggtctatttgctaaggaa
gaagccgaactcgataagtggctacaatttgccaacagcatcttcaataagcttgaagat
ctgcctgtaccaaccatttctgtactgaaaggtcatactcttggtggcggatgtgagtgt
gtactcgctactgacatgcgcattggtgataaaaccaccagcattggcttaccagaaaca
aaactcggtatcatgcctggctttggcggctgtgtgcgcctccctcgcgtcattggtgct
gacagtgccatggaaatcatcacacaaggcaaagcttgccgcgcagatgaagcgctaaaa
attggtctgctagatgctgttgtcgacagtgaatcactgtatgaatcagcactagcaaca
ctcaaacaagcaattaatgagaagctagattggcagcaacgccgtaaacaaaaaacctct
gcactgaccttaagtaagttagaagccatgatgagcttcacgatggcaaaaggtttagtg
gcacaaaaagcaggcccacactaccctgcgccaatgaaagcggtcatcgccattgaagaa
ggttcacgttttgcacgtaatgaagccctagatattgaacgtaagtacttcatcaaactg
gctaaatccgaagaagcgaaagcgctggttggccttttccttaacgaccagtacatcaag
ggcattgccaagaaagcggcaaaacatgccaacaaacaaactgaacgcgcagccgtgcta
ggtgcaggcattatgggtggcggtattgcttaccagtcggctctcaaaggcgtgccggtt
atgatgaaagacattgctcaggcatcgttggacctcggcatgacagaagcctctaagctg
ctcaataagcgcttgtcacgcggccgtatcgatggatttaagatggcgggtatactagca
tcaattactcctagcctacattacgcgggggttgaaaattcggatgtgattgttgaagcc
gtagtagaaaacccaaaagtcaaagccgccgtattaagtgaagtagaacaacaggtcagc
gaagatactgtcatcacttccaatacttcaacgatcccaattaacttgttggccaagtcg
cttcagcgcccagaaaatttctgtggtatgcacttcttcaacccagtgcaccgaatgcct
ctcgttgagatcatccgtggtgagcacacctctgatgaaaccatcaatcgtgttgtcgct
tacgccgctaagatgggtaaatcgccaatcgtggtcaatgactgtccaggtttcttcgtt
aaccgtgtactcttcccgtactttggcggcttcagcatgctacttcgtgatggcgcagac
tttactaaagtcgacaaaatcatggagcgccagtttggctggccgatgggtccagcttac
ctactggatgtagtgggtattgatactgcacaccacgcacaagaagtcatggcgaaaggt
ttccctgagcgtatgggtaaatcatctcgcgacgccattgatgcattgtttgacgccaat
aagtacgggcaaaagaatggcagcggcttctatagctacagtgtcgataaacgtggtaaa
ccgaaaaagaccttcagtgacgaggttttaccgattttgtctgaagtatgcagtcaagct
caagagttcgacgatcaaaccatcattcaacgtatgatgattccaatgattaatgaagtc
gtactgtgtttgcaggaaggcattattgcttctccgcaggaagccgacatggcattggta
tacggtctaggattccctccattccgcggcggtgtgttccgctacctagatagtgtgggc
atcgctgaatttgtagcgatggcagagcagcaccaaggtcttggtgctatgtatcaggtt
ccacaaatgctgattgatatggctgccaaaggcgaaaccttctatggcactcagcaacac
ggttctatctaa
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