Vibrio neptunius: KW548_02710
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Entry
KW548_02710 CDS
T08906
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
vnp
Vibrio neptunius
Pathway
vnp00300
Lysine biosynthesis
vnp00470
D-Amino acid metabolism
vnp01100
Metabolic pathways
vnp01110
Biosynthesis of secondary metabolites
vnp01120
Microbial metabolism in diverse environments
vnp01230
Biosynthesis of amino acids
Module
vnp_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
vnp00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
KW548_02710 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
KW548_02710 (dapF)
Enzymes [BR:
vnp01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
KW548_02710 (dapF)
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
QXX07019
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Position
1:567656..568486
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AA seq
276 aa
AA seq
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MHFHFSKMHGLGNDFMVVDCITQNIFFSPDLIRRLADRHTGVGFDQLLVVEAPYDPETDF
HYRIFNADGSEVEQCGNGARCFARFVRMKGLTNKYSFSVSTKKGKMVLNIEEDDQVTVNM
GVPEFEPSKIPFKAKQTEKTYILRTDDKTLFCGAVSMGNPHVVTVVDDTNTADVDTLGPL
LESHERFPERVNAGFMQVLSRSEVNLRVYERGAGETQACGSGACGAVAVGIVQELLDEKV
KVNLPGGSLKISWQGQGKPLYMTGPATHVFDGQLSC
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgcatttccacttttctaaaatgcatggtttgggtaatgacttcatggtcgttgactgc
attactcagaacattttcttttctcctgatttgatccgccgtctggcggatcgtcataca
ggagtcggctttgaccagctgttagtggttgaagcaccttatgatccagaaaccgacttt
cactaccgtatctttaatgctgatggtagtgaagtggagcagtgtggtaacggtgcacgt
tgttttgctcgttttgtgcgtatgaaaggcctgactaataagtacagcttcagtgtcagt
acaaagaaaggcaaaatggtcctcaatatcgaggaagacgatcaggtgacggttaacatg
ggtgtgccagaatttgagccaagcaagattccattcaaagctaagcagaccgaaaagacc
tatatcttgcgtactgatgataagacgttgttctgtggtgcggtaagtatggggaatcct
catgttgtcaccgtggttgatgataccaataccgctgatgtcgatactttaggcccgcta
ctcgaatctcacgagcgttttcctgagagagtaaatgctggctttatgcaggtattaagc
cgcagcgaagtgaatcttagagtgtatgaacgtggtgctggtgaaactcaggcatgtggt
agtggggcttgtggcgcggttgcagtaggtattgttcaggaactactggacgagaaggtg
aaagtcaacctgccaggtggttcgctaaaaatcagctggcaaggacaaggaaagcccctt
tatatgacgggccctgccactcatgtgttcgatggtcagctaagctgttaa
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