Vibrio neptunius: KW548_02760
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Entry
KW548_02760 CDS
T08906
Name
(GenBank) HDOD domain-containing protein
KO
K07181
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
vnp
Vibrio neptunius
Pathway
vnp05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vnp00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
KW548_02760
Enzymes [BR:
vnp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
KW548_02760
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HDOD
EAL
Motif
Other DBs
NCBI-ProteinID:
QXX07029
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All DBs
Position
1:576368..577594
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AA seq
408 aa
AA seq
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MRDTYVARQPILNAKRQTLGYELLFRDGENNAYPAHVDSNRATYRLVVENFLSLGTNPAF
AQSRSFINFPYKSLIRRLPLSLPREQIVIEVLETCPPTDELYEAIKELNAAGYLIALDDF
VYSPEWERFLPFVQIIKLDIMAMGLDAACEFVQEHKSRGIRRKFLAERVETEEEFLTARS
AGFSFFQGFFFSKPEVIRQQYISPEQVIAMELLREVCQTNVDFEKVEAIVAKDVALSYKL
LRFVNTMSERLEVSISSFRQALVYLGEDKLRIFVSLAVASFISAKKPKELYNLSLQRAQF
CQLMANENPFSQFREQAFLIGLFSTLDALLDLSLEELVKQLPLNQAIKVALLERQGPYGI
LLGLEECYERADWQGMQEACRQLNLSVDDVMPRISEAQRWSQDINRLV
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgatacctatgtggctcgtcagcccattttaaacgccaaaagacaaacgctcggg
tatgaactgttgttccgtgacggagaaaacaatgcatacccagctcatgtcgattccaac
cgtgcaacgtatcgtttagttgtcgagaacttcctgtctctgggcactaatcctgctttt
gcacaatcgcgcagtttcatcaactttccgtataaaagccttattcgtcgcttacctctg
tcgctgcccagagagcagattgtcattgaagtactggaaacttgtccaccgacggacgag
ctatatgaagcgataaaagagctcaacgcagcaggttacctgattgcactagatgacttt
gtttatagccctgagtgggaacgcttcttaccatttgttcagatcattaagcttgatatc
atggcgatggggttagacgcggcgtgtgaatttgtccaagagcataagtcacgtgggatt
cgccgtaagtttcttgctgagcgagttgaaacagaagaagaattcttgaccgcgcgctcg
gcgggcttttcgttctttcaaggcttcttttttagtaagcctgaagtcatccgtcagcaa
tacattagccctgaacaggtgattgcgatggagttgcttcgtgaagtatgtcagaccaac
gtcgacttcgagaaagttgaagctatcgtggccaaagacgttgcgctgtcttataaattg
ctccgctttgtaaacactatgtcggaaaggctcgaagtcagcatctcttcatttaggcag
gctttggtgtatcttggtgaagacaaacttcgtatctttgtgtcgttggccgtggcgtct
tttatttccgctaaaaagcccaaagagctgtacaatctttcgttgcaacgcgctcagttt
tgccagttgatggcgaacgaaaatccattcagccagttccgtgaacaggcctttcttatc
ggcttgttctcaaccttggatgcgttactggatctctcgcttgaggagttggttaagcag
ttgccgctcaatcaggcgattaaggtcgctttacttgagcgtcaaggtccttatggcatc
ttgcttgggttggaagagtgctatgaacgggctgactggcaaggcatgcaggaagcgtgt
cgtcaattgaacctatccgtcgatgacgttatgccgcgcatttctgaagcgcagcgctgg
agtcaggacatcaaccgcctagtatga
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