Vibrio neptunius: KW548_03805 Help Entry KW548_03805       CDS       T08906                                  Name (GenBank) RNA polymerase factor sigma-54   KO K03092   RNA polymerase sigma-54 factor Organism vnp  Vibrio neptunius Pathway vnp02020   Two-component system vnp02040   Flagellar assembly vnp05111   Biofilm formation - Vibrio cholerae Brite KEGG Orthology (KO) [BR:vnp00001]  09130 Environmental Information Processing   09132 Signal transduction    02020 Two-component system     KW548_03805  09140 Cellular Processes   09145 Cellular community - prokaryotes    05111 Biofilm formation - Vibrio cholerae     KW548_03805   09142 Cell motility    02040 Flagellar assembly     KW548_03805  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:vnp03021]     KW548_03805 Transcription machinery [BR:vnp03021]  Prokaryotic type   Bacterial type    RNA polymerase     Sigma factors      KW548_03805 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Sigma54_DBD Sigma54_CBD Sigma54_AID HTH_21 TetR_C_5-like Motif Other DBs NCBI-ProteinID:  QXX07188 LinkDB All DBs Position 1:complement(786309..787769) Genome browser AA seq 486 aa AA seqDB search MKPSLQLKLGQQLAMTPQLQQAIRLLQLSTLDLQQEIQEALDSNPLLEVEEGGDETSNVE DKSASEEKEPSAEVTEPEVKDSSELIEKSEISNELEIDTTWEDVYSANTGSTGIALDDDT PVYQGETTQSLHDYLTWQLDLTPFSETDRTIAMAIIDAIDDYGYLTISTGDILESFNHED IELDEIEAVRKRIQQFDPLGVASHNLQDCLLLQLATFPEDTPWLKEAKLVLTDHIEQLGN RDYKLIIKEAKLKEAELKEALKLIQQLDPRPGSRISAEHAEYVIPDVSVFKDHGKWVVTI NPDSVPRLKVNQQYAALGKGNNSDSQYIRSNLQEAKWLIKSLESRNETLLKVAKCIVEHQ RDFFEYGEEAMKPMVLNDVALDVDMHESTISRVTTQKYMHTPRGIFELKYFFSSHVSTDN GGECSSTAIRALIKKLVAAENSAKPLSDSKIAALLADQGIQVARRTIAKYRESLGIAPSS QRKRLL NT seq 1461 nt NT seq  +upstreamnt  +downstreamnt atgaaaccctcattacaactcaagctaggacagcagttagcgatgaccccacagcttcag caagccatccgcttgctgcagttgtcaacgttagatcttcaacaggaaattcaggaagcc ttggattctaatcctctcctagaagtagaagaaggcggcgacgagacctcaaatgttgaa gacaagtcagcgagtgaggaaaaagaaccaagtgcagaagtcacagagcctgaagtcaaa gacagttcagagcttatcgaaaaatctgaaatcagcaatgaacttgaaattgataccact tgggaagatgtctatagcgccaacacaggcagtacagggattgctcttgatgatgacacc cctgtttatcagggtgaaactacgcaatcactgcatgactacctgacttggcaattggat ctgacaccttttagcgagacagaccgcaccatagcgatggcaatcatagatgcaatcgat gactatggctacttaaccatttccactggcgatattttagaaagtttcaatcacgaagac atcgaattagatgaaatcgaagcggttcgcaaacgaatccagcaatttgatccactcggc gtagcatcacacaatctgcaagattgcctgctcttgcaattagcgacctttcctgaagac acaccgtggctcaaagaagctaagttagtactaactgaccacatagaacagttgggaaat cgtgattacaagttaataattaaagaagccaaactgaaagaagctgaacttaaagaagca ctcaagcttattcagcagctcgatcctagacccggaagccgaatctcagctgagcacgca gaatacgtcattcctgatgtttctgtgtttaaggatcatggtaaatgggtggtcactatc aacccagactccgtaccacgccttaaagtcaatcaacaatacgcagcgctcggcaaagga aacaattcagatagccagtatattcgctcaaacctgcaggaagcaaaatggctcattaag agcttggaaagtagaaatgagacactactcaaagttgctaagtgtattgttgaacatcaa cgcgattttttcgagtatggtgaagaagcgatgaaaccaatggtgctcaacgacgtcgca ttagatgtcgatatgcacgaatcgacaatttcacgggtcactactcaaaaatacatgcat acgcctcgtggtattttcgaactaaagtatttcttctccagccatgtcagtaccgataat ggtggagaatgttcatcaactgcaattagagccctaattaaaaagctcgtagctgctgaa aacagtgctaaaccgctgagtgacagcaagattgcagctctactcgctgaccaagggatt caggtcgctagaagaacaatagctaaataccgagaatcactaggcattgccccttccagt cagcgcaaacgcctgctttag

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