Vibrio neptunius: KW548_04305
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Entry
KW548_04305 CDS
T08906
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
vnp
Vibrio neptunius
Pathway
vnp02024
Quorum sensing
vnp03060
Protein export
vnp03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
vnp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
KW548_04305 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
KW548_04305 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
KW548_04305 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
vnp02044
]
KW548_04305 (ffh)
Enzymes [BR:
vnp01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
KW548_04305 (ffh)
Secretion system [BR:
vnp02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
KW548_04305 (ffh)
Eukaryotic Sec-SRP protein
KW548_04305 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
Zeta_toxin
AAA_22
KTI12
cobW
T2SSE
AAA_30
AAA_31
AAA_33
Mg_chelatase
AAA_18
APS_kinase
AAA_19
AAA_14
ABC_tran
ATP_bind_1
Rad17
KAP_NTPase
AAA_24
AAA_16
Thymidylate_kin
Motif
Other DBs
NCBI-ProteinID:
QXX07265
LinkDB
All DBs
Position
1:873087..874469
Genome browser
AA seq
460 aa
AA seq
DB search
MFDNLTDRLSKTLKNISGKGRLTEDNIKDTLREVRMALLEADVALPVVRDFVKRVKEGAV
GVEVSKSLTPGQEFIKIVQSELEAVMGESNEALNLAAQPPAVILMAGLQGAGKTTSVGKL
SKLLKERDKKKVLVVSADVYRPAAIKQLETLASDIGVDFFPSSPDQKPIDIANAAIDHAK
KKFYDVLLVDTAGRLAIDEQMMGEIQELHSTIDPVETLFVVDAMTGQDAANTAKAFGDAL
PLTGVILTKVDGDARGGAALSVRHITGKPIKFLGVGEKTDALEPFHPDRVASRILGMGDV
LSLIEDLQRNVDTEKAEKLAKKFKEKKGFDLEDFREQLGQMQNMGGMMGMMDKLPGMSNL
PDNVKDKVDDKMFKQMEAIINSMTMKERQRPELIKGSRKKRIAAGSGTQVQDVNRLLKQF
TQMQKMMKKMQKGGMKGMMRNMQGMMGGMGGGGGFNPFGR
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgtttgataatttaacggatcgattatccaaaacgctgaagaacatcagcggcaaaggt
cgtttgaccgaagacaatattaaagacactttacgtgaagtgcgcatggcattgcttgag
gcggatgtcgctcttccggttgtacgtgattttgttaagcgcgtaaaagaaggtgctgtg
ggcgtagaggtttctaagtctcttacgcctggccaagagttcattaagattgttcaatct
gaacttgaagctgttatgggtgagtccaatgaagctctgaatcttgcagcacagccgcca
gctgtgattttaatggcaggtttgcaaggcgcgggtaaaactacctcggttggtaagctt
tctaagctgcttaaagagagagacaagaagaaagtcttggttgtttctgcggacgtttat
cgcccagcggcgatcaaacagttagaaacgcttgcttcagacattggggtcgatttcttc
ccatcttcgcccgatcaaaagccgattgatattgccaacgcggcgatagaccatgcgaag
aagaaattttatgacgttctcctcgtcgatactgcgggtcgcctcgcgatcgatgagcag
atgatgggcgagatccaagagcttcactctacgattgatcctgttgaaaccttgtttgtt
gtcgatgcgatgacaggtcaggatgccgcaaacacggctaaagcctttggcgatgcgtta
ccactgacaggggttatcttaaccaaggtagatggtgatgcgcgcggcggtgctgcactt
tcggttcgtcatatcacaggtaaaccaattaagttcttaggtgttggtgaaaaaaccgat
gcgctagaaccattccacccagatcgtgttgcttcacgtattcttggcatgggtgacgtc
ctgtcgcttatcgaagacctacaacgcaatgtggatactgagaaagcagagaagctagcc
aagaagttcaaagagaagaaaggtttcgaccttgaagactttcgtgaacaacttggccaa
atgcagaatatgggtggcatgatgggtatgatggacaagctgccaggtatgagtaatttg
ccagacaacgtcaaagataaagttgatgacaagatgtttaagcaaatggaagccattatc
aattccatgaccatgaaagaacgtcaacgccctgagttgattaaaggctcacgtaagaaa
cgtattgccgcgggttctggtactcaggttcaggatgttaaccgattactcaagcaattc
actcagatgcagaaaatgatgaagaaaatgcagaagggtggaatgaaaggcatgatgcgc
aacatgcaaggcatgatgggtggcatgggtggaggcggtggcttcaatcccttcggacgc
taa
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