Vibrio neptunius: KW548_04460
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Entry
KW548_04460 CDS
T08906
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
vnp
Vibrio neptunius
Pathway
vnp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vnp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KW548_04460 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vnp03019
]
KW548_04460 (pcnB)
Enzymes [BR:
vnp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
KW548_04460 (pcnB)
Messenger RNA biogenesis [BR:
vnp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
KW548_04460 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
DUF6279
Motif
Other DBs
NCBI-ProteinID:
QXX07292
LinkDB
All DBs
Position
1:complement(905423..906787)
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AA seq
454 aa
AA seq
DB search
MNKNDYTPSEKENYPELSLNIITRQEHNISRKQISDNALKVLYRLHGAGFEAFLVGGGVR
DLLLGQSPKDFDIATNATPEQIRQLFKNCRLIGRRFRLAHIMFGRDIIEVATFRGHHQET
SKNISQQSKEGMLLRDNVYGTIDEDAERRDFTINAMYYNIGDYAIHDYAGGNEDLEDRLV
RLIGDPETRYREDPVRMLRAIRFAVKLDFDIEEETAAPIEEMSPLLRDIPSARLYEESLK
MLQSGYGLETYHLMREYNLFQQLFPIISADFTADYASKTEQMLDLVLDSTDQRIEEGKRI
NPAFMFAAMLWYPLQVRAALLMEKRKLPYYDAIMEASNYILDDQVRTIAIPRRHTATIRE
IWQLQLRMPRRNGKRAFRLMELNKFRAGYDFLEMRGEIEGGETEQLAKWWETFQNAGRNM
RQAMVADLDVDSPEPSKKRRRKPFRKKKSKAQSS
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaaacgactatacaccaagcgaaaaagaaaattatccagagctatctctgaac
attattactcgccaagagcataatatctctcgcaaacaaatcagtgacaatgcattgaag
gtgctataccgacttcatggtgcaggctttgaggccttcctagtcggtggtggcgtacgc
gatctactactgggtcaaagcccgaaagattttgatatcgctaccaatgccactcctgag
caaattcgtcaattgtttaaaaactgccgcttaattggtcgccgttttcgtctcgcacac
atcatgtttggccgcgacatcatcgaggtagcgacatttcgtggtcaccatcaggaaacc
agtaaaaacatctctcaacaatccaaagaagggatgctgttacgcgacaatgtctatggc
accatagatgaagatgctgagcggcgtgatttcaccatcaatgcaatgtattacaacatc
ggtgattatgcgattcatgactatgctggcggtaatgaagacttagaagaccgattagta
cgcctgattggcgaccctgaaacgcgttatcgtgaagatccagtgcgcatgctgcgtgcc
attcgttttgccgtaaagctcgacttcgatatcgaagaagaaacggccgcacctatagaa
gaaatgtcaccgctgctacgtgatattccatcggcacgcctgtatgaagagtcactgaag
atgctgcaatcaggatatggtctagaaacttatcacctgatgcgcgaatacaatcttttc
cagcaattgttccctatcatctctgctgatttcactgcagactacgcttccaaaacagaa
cagatgcttgacttagttcttgattcaaccgatcaacgcatagaagaaggcaaacgtatc
aaccctgcatttatgttcgctgctatgttgtggtatccgttgcaggttcgtgctgcccta
ctgatggaaaagcgcaaactgccttactacgacgctatcatggaagcgagcaactacatt
cttgatgatcaggttcgtactattgccataccacgccgccataccgccactattcgagaa
atttggcagttacaactgcgcatgccacgccgaaatggcaaacgcgccttccgcttgatg
gaattgaataagttcagagcggggtatgacttcctcgaaatgcgaggagagattgaaggt
ggtgaaactgaacagctagcaaaatggtgggaaaccttccaaaacgctggacgtaacatg
cgccaagccatggttgccgatctcgatgttgattcgcctgagccaagcaagaagcgacgt
cgcaagccatttcgtaagaaaaagagcaaggctcaatcatcatga
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