Vibrio neptunius: KW548_04980
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Entry
KW548_04980 CDS
T08906
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
vnp
Vibrio neptunius
Pathway
vnp00470
D-Amino acid metabolism
vnp00550
Peptidoglycan biosynthesis
vnp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vnp00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
KW548_04980 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
KW548_04980 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vnp01011
]
KW548_04980 (murD)
Enzymes [BR:
vnp01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
KW548_04980 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
vnp01011
]
Precursor biosynthesis
Amino acid ligase
KW548_04980 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MurD-like_N
Mur_ligase_M
Mur_ligase_C
DAO
NAD_binding_9
Motif
Other DBs
NCBI-ProteinID:
QXX07380
LinkDB
All DBs
Position
1:1039736..1041055
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AA seq
439 aa
AA seq
DB search
MDRWQNIESVVVVGLGITGLSVVKYLVKLPYYLTIRVIDTRDNPPGSEALPEGVELHSGG
WNLDWLMAADLIVANPGIALTNPEIQHAIDSNIRVVGDIELFAWQVDKPVLAITGSNGKS
TVTDLTGVVANAAGVKTAIGGNIGVPALDLLEQEAELYVLELSSFQLETTSSLSLKAAAF
LNLSEDHMDRYDGMEDYRQAKLRIFDNAQACIVNADDLATYPDKDHAPLVEFSLEKNCEF
HIKVVDGREYLCHQNVKILASDELNLVGRHNLANALVVFALLEQAGIAISLGIDALRTYS
GLTHRCQVVMDNQGVKWVNDSKATNLASTLAALSGLTLSGRLYLLVGGDGKGADFSELAS
VLSPLNVQLCCFGADGDKFLPLHPDAKRFETLEEIVKWVSLQVEPGDMVMLSPACASFDQ
FKNFMARGEAFAALAKQYA
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atggatcgttggcagaacatagagagtgttgtcgttgtggggctcggtattactgggctc
tcggttgttaaatacttggtaaaattaccttactatttaaccattcgcgtcatcgataca
cgcgataacccaccgggtagtgaagcgctacctgagggagttgaacttcattctggtggt
tggaacttggactggttgatggcagccgatttgatcgtcgccaatcctggtattgcgctg
accaatccagaaattcaacatgctatagactctaatattcgcgtagttggtgatatagag
ctgttcgcttggcaggtagataagccagttttggcaataacaggctcaaacggtaagagc
actgtgaccgatttgacgggtgtggtcgccaatgccgcgggagtaaaaactgccattggc
ggtaatattggtgtacctgcgttggacttgcttgagcaagaagccgaattgtatgtgctt
gagttatccagttttcagttggaaacaacatctagcctaagtcttaaagcggcggccttc
ttaaatctgtctgaggatcatatggatcgctatgacggtatggaagactatcgtcaggct
aaacttcgcatttttgataatgctcaggcatgtattgtcaatgcagatgatctcgctacc
tatccagacaaggatcatgcccctctcgtcgaatttagcctagaaaaaaattgcgagttc
catatcaaagtcgtggatggaagagagtacttgtgtcaccaaaatgtaaaaatattggcg
tctgatgagcttaacctagtgggaagacacaatttagctaatgcattagttgtctttgcc
ttactcgaacaagccggtattgctatttctctcggaatagatgcacttaggacttacagc
ggcctgacacatcgatgtcaggtagtcatggataatcagggtgttaagtgggtcaacgat
tccaaagctaccaacttagcaagtacattggcagcactttccggtttaactctctctggc
agactgtatttgttagtcggtggtgacggaaaaggggcggatttttctgaattagcgtca
gtattgagtccattgaacgttcagctatgttgttttggagctgacggcgataagtttctg
ccgttacatccagacgccaaacgatttgagactcttgaagagattgtaaaatgggtcagc
ttacaggtcgagccaggagatatggttatgttgtctcctgcatgtgcgagctttgatcag
tttaagaattttatggcacgtggtgaggcttttgctgccctcgctaagcaatatgcttaa
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