Vibrio neptunius: KW548_05065
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Entry
KW548_05065 CDS
T08906
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
vnp
Vibrio neptunius
Pathway
vnp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vnp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KW548_05065 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vnp03400
]
KW548_05065 (ung)
Enzymes [BR:
vnp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
KW548_05065 (ung)
DNA repair and recombination proteins [BR:
vnp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
KW548_05065 (ung)
Prokaryotic type
KW548_05065 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
OB_SHLD2_2nd
Motif
Other DBs
NCBI-ProteinID:
QXX07395
LinkDB
All DBs
Position
1:1062668..1063354
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AA seq
228 aa
AA seq
DB search
MNPSLTWQDVIGAEKQQDYFQQTLNFVESERASGKAIFPPAKDVFNAFRATEFNDVKVVI
LGQDPYHGPRQAHGLCFSVLPGIKTPPSLVNMYKELAQDIDGFQIPAHGYLQSWAEQGVL
LLNTVLTVEQGKAHSHSKTGWETFTDKVIEAVNQHQSGVVFLLWGSHAQKKGRFIDRNKH
HVLAAPHPSPLSAHRGFFGCRHFSQANHILSSQGKPTINWHLPAQVNM
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgaacccgtcattgacatggcaagacgtcattggggctgaaaagcagcaggactatttt
cagcagacgttgaattttgttgaatcggaaagggcatcaggtaaagcgatctttcctccg
gcaaaagatgtgtttaatgcctttcgggcgactgagtttaatgacgtgaaagttgtgatc
ttaggacaggatccttatcacggccctcgacaggctcatggtctgtgtttctctgtttta
ccaggtatcaagactcctccctctttagtcaatatgtataaagagttagcacaggacatt
gatggttttcagattccggcgcatggttaccttcaaagctgggctgaacaaggtgttttg
ctacttaatactgttcttacggtcgaacagggaaaagcccattcgcattctaaaaccggt
tgggaaacctttactgacaaagtcattgaagcggttaatcagcatcagtctggtgtggtg
tttttactttggggctcccatgcgcaaaagaaggggcgtttcatcgaccgcaataagcac
catgtattagctgcgccacacccttctccattgtcagcgcatcgcggatttttcggttgc
cgacacttttctcaagcaaatcatattcttagttcacaaggtaaaccaactataaattgg
caccttcctgctcaagtcaatatgtag
DBGET
integrated database retrieval system
