Vibrio neptunius: KW548_05140
Help
Entry
KW548_05140 CDS
T08906
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
vnp
Vibrio neptunius
Brite
KEGG Orthology (KO) [BR:
vnp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vnp03400
]
KW548_05140 (radA)
DNA repair and recombination proteins [BR:
vnp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
KW548_05140 (radA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
Lon_C
GvpD_P-loop
DUF7125
SLFN-g3_helicase
AAA
Rad51
RecA_N
AAA_22
nSTAND3
AAA_16
AAA_14
nSTAND_NTPase5
AAA_24
NTPase_1
ABC_tran
zinc_ribbon_6
Zeta_toxin
AAA_29
Zn_ribbon_8
AAA_5
Viral_helicase1
DAP3
Zn_ribbon_Thio2
Motif
Other DBs
NCBI-ProteinID:
QXX07409
LinkDB
All DBs
Position
1:1079302..1080681
Genome browser
AA seq
459 aa
AA seq
DB search
MAKAKRAYVCNDCGADFPRWQGQCNACGSWNTISEVRLAASPAAARNERLAGYAGNSGET
QVQTLSDIDLQEVPRFTSGFKEFDRVLGGGVVPGAAILIGGNPGAGKSTLLLQTMCYLAS
QMPTLYVTGEESLQQVAMRASRLGLPKDNLKMLSETNVDRICQIAEKEQPKIMVIDSIQV
MHVADVQSSPGSVAQVRESATALTRYAKQNNVSVFIVGHVTKDGTLAGPKVLEHIIDCSV
LLDGGTDNRFRTMRSHKNRFGAVNELGVFAMTGQGLKEVSNPSAIFLSRGEEETSGSSVM
VVWEGTRPLLVEIQALVDYSQLANPRRVAVGLEQNRLSLLLAVLHKHGGLQMADQDVFVN
VVGGVKVTETSADLALVIALLSSFRDRALPKDVVIFGEVGLAGEIRPVPSGQERLNEAFK
HGFKKAIVPAANMPKGGIPGMQIHGVKKLSEAIEAFDEL
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaagcaaaaagagcatatgtgtgtaatgactgtggggcagattttccgcgttgg
caaggacaatgcaatgcttgtgggtcgtggaatacgatcagtgaagtcaggttggcggca
tcaccagcagcggcacgcaatgagcggttagcgggttatgcaggtaactctggtgaaact
caggttcagaccctatctgacattgatttgcaggaagttcctcgttttaccagtggtttt
aaagagtttgatcgtgttcttggtggcggtgtagtgccgggtgctgccattctgattggt
ggtaacccaggagcgggtaaatcaacgctacttttgcaaactatgtgttatctcgcctca
caaatgccaaccttatacgtcacaggtgaagagtcgttacaacaggttgcgatgcgagcg
tcacgactcggtttgcctaaagacaacctgaaaatgctttcagaaactaacgtcgatcgt
atctgtcaaattgctgagaaagagcaacctaagatcatggtcatcgactcgattcaggtg
atgcatgttgcggatgtgcaatcatcaccaggcagtgtggcacaagtgcgtgagtcggct
acggccttgactcgttacgctaagcagaacaatgtttctgtttttattgtcggccatgtg
acgaaagacgggacgttagcggggcctaaagtgcttgagcacatcattgactgttcagta
ttgcttgatggcggaacggataatcgttttagaactatgcgcagccataagaaccgcttt
ggagcagtcaatgagctaggggtatttgcgatgacagggcaggggctcaaagaagtcagc
aatccgtcagccatcttcctttctcgaggggaagaagaaacatctggtagctcagtcatg
gtggtatgggagggcactcgtcctctattggtcgagattcaagctttggttgattactct
cagttggctaacccacgtcgtgttgctgtgggccttgagcaaaaccgcttgtcgctcttg
ctggcggttttacacaagcacggtggtttacagatggcggatcaagatgtgtttgttaat
gtcgttggtggtgtcaaggtaacagaaaccagcgctgacttggcattagtgattgcgctt
ctatccagttttcgagatcgggctttacctaaagatgtggtgatattcggtgaagtcggc
ttagcaggagagattcgtccggttccaagtgggcaggagaggttgaatgaagcctttaag
catggttttaagaaagcaattgttccggcagcgaatatgcctaaaggtgggatcccggga
atgcagatccatggtgtgaaaaaactttctgaagcgattgaagcttttgacgaactgtaa
DBGET
integrated database retrieval system
