Vibrio neptunius: KW548_05515
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Entry
KW548_05515 CDS
T08906
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
vnp
Vibrio neptunius
Pathway
vnp03030
DNA replication
vnp03430
Mismatch repair
vnp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vnp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KW548_05515 (dnaQ)
03430 Mismatch repair
KW548_05515 (dnaQ)
03440 Homologous recombination
KW548_05515 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vnp03032
]
KW548_05515 (dnaQ)
03400 DNA repair and recombination proteins [BR:
vnp03400
]
KW548_05515 (dnaQ)
Enzymes [BR:
vnp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KW548_05515 (dnaQ)
DNA replication proteins [BR:
vnp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KW548_05515 (dnaQ)
DNA repair and recombination proteins [BR:
vnp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KW548_05515 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
QXX07469
LinkDB
All DBs
Position
1:1158255..1158995
Genome browser
AA seq
246 aa
AA seq
DB search
MNTSNNSNHNRIVVLDTETTGMNREGGPHYQGHRIIEIGAVEIINRKLTGRHFHVYIKPD
REIQPDAVEVHGITDEFLVDKPEYQDVHKEFIEFIKGAELVAHNAPFDTGFMDYEFGMLD
PTIGKTDDYCKVTDTLAMAKKIFPGKRNNLDVLCDRYGIDNSHRTLHGALLDAEILADVY
LLMTGGQTSLQFNPGSAEGNVGGESIKRAAGGRKSLKVIRATADELEAHQNRLDLVEKSG
SCLWRQ
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgaataccagcaacaattccaaccacaatcgcatcgtggtactcgataccgaaaccaca
ggtatgaaccgtgaaggtggtcctcattatcaagggcaccgtattatcgaaatcggtgcg
gtggaaatcatcaaccgtaaactgaccggacgtcattttcacgtttacatcaaacccgat
cgtgaaattcagcctgacgctgttgaagttcacggtatcactgacgagtttctggtcgac
aaaccagagtatcaggatgtccataaggaatttatcgagtttattaaaggcgctgaatta
gtcgcacacaacgcgccctttgataccggttttatggattacgagtttggtatgctcgat
cctacgatcggtaaaactgacgactactgtaaggtgaccgatacgcttgccatggcgaag
aaaatcttccccggcaaacgaaacaaccttgacgtattatgtgatcgctacggtatagat
aactctcaccgtaccctccacggcgctttgctcgatgcggagatactggctgacgtttat
ctgttaatgacaggtggccagacatcactgcaatttaacccgggcagtgcagaaggtaat
gtgggaggtgaatcaataaaacgggctgctggtgggcgaaaatcgctaaaggttatccgt
gcaacggccgatgaactagaagcacatcaaaatagattggatctggtggagaagagcgga
agctgtctctggcgtcagtag
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