Vibrio neptunius: KW548_05590
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Entry
KW548_05590 CDS
T08906
Symbol
treR
Name
(GenBank) trehalose operon repressor TreR
KO
K03485
LacI family transcriptional regulator, trehalose operon repressor
Organism
vnp
Vibrio neptunius
Brite
KEGG Orthology (KO) [BR:
vnp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vnp03000
]
KW548_05590 (treR)
Transcription factors [BR:
vnp03000
]
Prokaryotic type
Helix-turn-helix
LacI family
KW548_05590 (treR)
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GFIT
Motif
Pfam:
LacI
Peripla_BP_3
Peripla_BP_1
Peripla_BP_4
SpoIIID
HTH_3
HTH_IclR
HTH_7
HTH_23
Motif
Other DBs
NCBI-ProteinID:
QXX07483
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All DBs
Position
1:1173674..1174621
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AA seq
315 aa
AA seq
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MNKKLTILDIAKLSGVGKSTVSRVLTNDPKVKPETRAKVERVIEESGYVPSKSAQAMRGG
SQKVVGVIISRLDSPSENKAVSSMLQVLYGNGYDAVIMESQFDRKMTNEHLDVLRRRNVD
GVIVFGFSDFDIERLSSWQHRSLVIAMDTDETSSINYDNTGVIRYALEHLQRQSVSEIAF
IGVDPSDRTTGKIRLNAYLDWCSEHRLSPNYQTGHLHHESAYRLVDKVLSQTTQAIVCAS
DTLALGVIKRLQELDREDVMVTGVGGNELLSFLFPRVFSIDPGYAQAGERAAKLLISQLN
GESELVHLTQEPILS
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaaaactgaccattcttgatattgctaaactttctggcgttggtaaatctacg
gtttcccgtgtgttgacgaatgaccctaaagtcaaacccgagactcgcgccaaggttgag
cgtgtgattgaagagtctggctacgttccgtctaagtcggcgcaagcgatgcgcggaggc
agtcagaaagtggttggtgtcatcatctcgcgtcttgattcgccttcggaaaacaaagcc
gttagcagcatgcttcaagttctttacggtaacggctatgacgcggtgatcatggaaagc
caatttgaccgcaagatgaccaatgaacacctcgacgttttgcgcaggcgtaatgttgac
ggcgtgattgtgtttggctttagtgattttgacatcgagcgtctttctagctggcagcat
cgttcgctggtgattgccatggatactgatgaaacgtcatcgatcaactacgataataca
ggtgttattcgttatgcgctggaacaccttcagcgccaatcggtgagcgagattgctttt
attggtgttgatccttcagaccgaactactgggaagattcgtctcaatgcttacttagat
tggtgttcagagcatcgattatctcccaactatcaaacaggccatctgcatcacgaaagc
gcttatcgtttggtggataaagtgttgagtcaaaccacacaggcgattgtatgcgccagt
gatactttggcattgggtgtgattaaacgtcttcaagagttggacagagaagatgtgatg
gtcacaggtgttggtggcaatgaactgttgtcttttctatttccgagagtattcagtatc
gatccgggttatgctcaggctggagaaagggcggccaagcttctgatttctcagctcaat
ggagaatctgaactcgtacacctcactcaggaaccaattttgagttaa
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