KEGG   Vibrio neptunius: KW548_07155
Entry
KW548_07155       CDS       T08906                                 
Name
(GenBank) sigma-54 dependent transcriptional regulator
  KO
K10126  two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
Organism
vnp  Vibrio neptunius
Pathway
vnp02020  Two-component system
Brite
KEGG Orthology (KO) [BR:vnp00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    KW548_07155
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:vnp02022]
    KW548_07155
Two-component system [BR:vnp02022]
 NtrC family
  DctB-DctD (C4-dicarboxylate transport)
   KW548_07155
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 AAA_lid_14 HTH_8 AAA_5 Mg_chelatase AAA_16 LysR_substrate FleQ OKR_DC_1_N GFO_IDH_MocA AAA
Other DBs
NCBI-ProteinID: QXX07735
LinkDB
Position
1:complement(1479741..1481096)
AA seq 451 aa
MQQTTKHPIVLIEDDPIVRQTTAQWLQLAGFELTTFDNGTAALAAITQHEFMAIISDVRL
PGIDGLELLQQVKQQAPDIPVILITGHGDVDMAVNALQQGAYDFIEKPFEPERLAQTVNQ
AIQPYIESQKWRSRQTYLQSLEGIEQILIGRSRVMCELREQVQKIASIDTNVIIYGDTGC
GKELVAYCLHHFSTRQPHPFVPLNCGAIPDNLFESELFGHEAGAFTGAAKRRIGKIEFAD
KGTLFLDEIESLPLAMQVKLLRALQENTVERVGSNHAKAVNLRVISAAKCDLLNHSEFRP
DLFYRLNIAQLYLPALKDREEDALLLFEHFTQEANTNTRRPSPADQQMLLSYPWPGNVRE
LRNVAIRFALDDSLTVGDILSCRPQTTTAGIKQGLPLAIQMQSFERKILHEALKRHQGRI
NDVLEELDLPRRTLNQKMVKYALNRSDYTPS
NT seq 1356 nt   +upstreamnt  +downstreamnt
atgcaacaaacaactaaacaccctatcgtgctgatcgaggacgatcccatcgttcgtcag
acgacagcacaatggcttcaactggctggctttgaacttaccacctttgacaatggtacg
gcggcactcgccgccattactcaacacgaattcatggcaatcatcagtgatgttcgctta
cctggcatcgacggcttagagttgctacagcaagtgaagcagcaagctcctgatattcca
gtgatcctgatcactggacatggtgatgtcgacatggcagtcaacgctctgcaacagggc
gcttacgattttatcgaaaaaccgttcgaacctgagcgcttagcacagaccgtcaaccaa
gccatccaaccctatatcgaatcgcaaaaatggcggtcacggcagacctacctacaaagc
cttgaaggcatagaacagatattgataggacgcagtcgggtaatgtgtgaactgcgtgaa
caggtgcagaaaatcgccagcattgataccaacgtcattatttatggtgatacagggtgc
ggaaaagaattggtcgcttactgtctgcatcacttcagcacccgacagccgcacccattc
gttccactcaattgcggtgcaataccggataacctatttgaaagtgagttgtttggtcac
gaagctggtgcttttaccggggctgccaagcggcgcatcggcaagatagagtttgctgac
aaaggcactttatttctggatgaaattgaaagcctacctttggcaatgcaagttaagctg
ttgcgcgcgctgcaagaaaacaccgttgaacgcgtgggcagtaaccatgctaaagcggtt
aacttacgcgtgatctccgctgctaaatgtgacttgctaaaccactctgaatttcgccca
gatctgttttaccgtttgaatatcgcccagctttatttacccgctttgaaagaccgcgag
gaagacgctttactgctgtttgaacattttactcaggaagccaataccaacacccgacgt
cccagccctgctgaccaacaaatgttgctcagctacccttggccaggcaatgttcgtgag
ctacgcaatgtcgcgattcgttttgcactggatgattctctaaccgttggagacattctc
tcatgccgtccacaaacgaccacagccggcatcaagcaaggtttgccgctcgccattcag
atgcaaagcttcgaaagaaaaattctccacgaagcgttgaagcgccatcagggacgcatc
aatgatgtgctggaagagctcgatttacccagacgaactctcaaccaaaagatggtcaaa
tatgcgctaaaccgaagtgactatacgccctcttag

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