Vibrio neptunius: KW548_07810
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Entry
KW548_07810 CDS
T08906
Name
(GenBank) WD40 repeat domain-containing protein
KO
K20332
toxoflavin biosynthesis protein ToxC
Organism
vnp
Vibrio neptunius
Pathway
vnp02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vnp00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
KW548_07810
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_EML
WD40_MABP1-WDR62_1st
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Beta-prop_NUP159_NUP214
NBCH_WD40
Beta-prop_WDR35_TULP_N
Beta-prop_Vps41
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_HPS5
Beta-prop_WDR75_1st
eIF2A
Beta-prop_Nup120_160
Beta-prop_SCAP
Cytochrom_D1
Beta-prop_IFT140_2nd
RMC1_N
Me-amine-dh_H
Beta-prop_DCAF12
Motif
Other DBs
NCBI-ProteinID:
QXX07841
LinkDB
All DBs
Position
1:1613924..1615594
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AA seq
556 aa
AA seq
DB search
MKHTSSISGIASFKDKFIATAGYDNRVILWNALDNTPINQVNHDHLANQCSFSGDGQYLV
SSSSDYSARIWQLPDLRLKTVLYGHTDDVEMSQFSPDSRLVATCSRDHTIRIFDLNGETR
QIMRGHEADVISVSWSACGTSLISSSDDGTIRTWDVDSGQQLACIDLGGVETDTIALSRD
GKIFAGDDEGRLTVIDGEQKTHINAHKAGVKRVVWDESSRKLISLSYDRSAIIWQLVDGQ
LVQQSQTDLPSIVWPRSCAFLGADRVAFVTFGSTYAIWNYADDEWLTEHIDDSTSLNAVS
SIEGRLYAIGDAGKLSVDGNPVQEMGSLCNFLQPFGEYLLSGGQMGKVFDAKTGKLIHQH
HSPLNCCATFSRQGVEFAVIGTYTGEGLLFNLDNSGAIAYYGTLSMHDNAIKGLAANGET
IFSVCATGAAAYHDIESFELSSYLPEAHEKISNACVAFGKQYASVGRDLKLTLWIDGEPQ
RYSSPHMNSIKCIASSEDERYLATGSYGGSVAVFDTVERKWAPLTKPTTSGISSLIYCND
KQSFVASSYDGQAYVI
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgaaacatacttcttcaatcagcgggatcgcgagctttaaggataaatttatcgcaacg
gcgggttatgacaaccgtgtgattttgtggaatgcactagacaatacaccgattaatcaa
gtgaaccatgatcatcttgccaatcagtgcagctttagtggagatggacaatacctggtg
agttcgagcagtgactatagtgctcgcatctggcaactgcctgacttaaggttgaaaacg
gtgctttatggtcacactgatgacgtagaaatgtcgcagttttcgccagatagccgttta
gtggcgacgtgttctcgtgaccataccattcggatttttgatctcaatggcgagacgcgc
cagattatgcgtggacatgaagctgatgtgatttcggtaagttggtcagcctgtgggacg
tctttgatttcaagtagcgatgacggaaccattcgtacttgggatgtggactccggacaa
caacttgcttgtatcgatttaggtggcgtcgagaccgataccattgcgttaagccgtgac
ggaaagatttttgctggtgatgatgaaggccgattaacggttattgatggcgaacaaaaa
acacacattaatgcacataaagccggtgtaaagcgtgtggtatgggacgaatcaagtcgc
aagctcatcagtttgagttatgaccgaagtgcgattatttggcaactggtggatgggcaa
ttagtacagcagtcgcaaacagacttaccaagtattgtctggcctcgtagctgcgcattc
ctaggcgctgatcgcgtagcttttgtcacgtttggttcaacttatgcgatatggaattac
gcagacgatgagtggttgacggagcatatcgatgactcaaccagcttgaatgccgtatca
agtattgaaggtcgcctctacgcgattggagatgcagggaaactgtctgtagacggcaat
ccagttcaagagatgggtagcttgtgtaacttcctacaaccatttggtgaatacctactg
tctggtgggcaaatgggtaaagtttttgacgcgaaaacaggcaaactcatccaccagcat
cattcgcctctaaactgctgtgcaacattttcacgtcaaggtgttgagttcgcggtgata
ggtacctacaccggagaggggttgctatttaatctcgataacagtggcgcgattgcctat
tacgggacgctgtccatgcacgacaatgcgataaaagggttggcagccaacggagagacg
atctttagcgtatgtgcgacgggtgctgcggcataccacgacattgaatcttttgagctt
tccagttatctgccagaagcgcatgagaaaatctccaacgcttgtgtggcgtttggcaaa
cagtatgcgagtgtcggacgggatctcaagttaacgctttggattgacggagagccacag
cgctatagcagcccgcatatgaactcaataaagtgtatcgccagcagtgaagatgaaaga
tatctcgctacaggtagctatgggggtagcgtagcggtatttgatacggttgaacgcaaa
tgggcgcctttaactaaaccaacaaccagcggtatttcgagcttgatttattgcaatgac
aaacaatcatttgttgcgagttcttatgatggacaagcttacgttatctaa
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integrated database retrieval system
