KEGG   Vibrio neptunius: KW548_07970
Entry
KW548_07970       CDS       T08906                                 
Symbol
hsdR
Name
(GenBank) type I restriction-modification system endonuclease
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
vnp  Vibrio neptunius
Brite
KEGG Orthology (KO) [BR:vnp00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:vnp02048]
    KW548_07970 (hsdR)
Enzymes [BR:vnp01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     KW548_07970 (hsdR)
Prokaryotic defense system [BR:vnp02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   KW548_07970 (hsdR)
SSDB
Motif
Pfam: ResIII EcoEI_R_C SWI2_SNF2 DEAD Helicase_C HSDR_N DUF4145 SLFN-g3_helicase AAA_19 AAA_22 PhoH Mis12 UvrD-helicase
Other DBs
NCBI-ProteinID: QXX07865
LinkDB
Position
1:1661884..1665438
AA seq 1184 aa
MASSNFEFLKGVNDFLFAIARAAEKNYPDDPNTTLVKLRVFGEATAKHLAKLLDIDIPDN
QNDLLRELGKIPFVDDAILGVFHKLRKIGNQAVHEYHNDLDDAAMCLRLAFRLAVWYYRL
VTKNYDFAVPEFVLPTSQSGEQFEQEILSLKHELELAKQSETQTKAEVEAQKAKLTALNG
YISVLESKQEETQEQSEARIAALTAKLKEKEAELSAKTEVERKAYRKQIANEASQRSLNL
DEAETRYLIDAQLRKAGWDADTNNLKFSKGTRPEVGRNMAIAEWPTSGDETGKTGFADYV
LFVGLKPIAVVEAKQQNKDVAAKLTEAYRYSKYFEHDLLRSELEALASDQEQLDKVAEAI
PKYIHTWNDSGAGETYKVPFCFSANGRDYRAAVKTKSGIWYRDVRHATNMPKALPEWHRP
EELLAKLEDDVHYQNSWFSQNADMSDLGLRYYQEEAVQAVETAIVAGQQDILLAMATGTG
KTRTAIALMYRLIQSQRFKRVLFLVDRTSLGKQALDSFEDTNIKGDTFNAIFNIKGLTDR
FPEDSTKIHVATVQSLVKRTLQSDEVMPVGRYDCIIVDEAHRGYILDKEQTEGEEKFRNL
QDFISSYRRIIDHFDAVKVALTATPALHTIDIFGGEQQKPVYRYSYRKAVIDGYLCDQEP
PINIITKLSQDGLYLSKGTEVQRLSNQGELLNDQLEDEQGFEVADFNRTLIASNFNKVVC
EELTNHIDPVNHIDPANPQKTLVFCVNNTHADMVVEELRTAFKAKYPQLEHDAIIKITGD
ADKDATKVQSMITRFNKERLPNIVVTVDLLTTGIDIPSICNLVFMRKVRSRILYEQMKGR
ATRLCPQAGKTSFRIFDAVDLYSTLQSVDTMRPVVVRPQVELQTLVNEITDSETYKTIEA
DGRSFAEHSHEQLVSKLQRIVSHAQFNRNKSKPVDEHIKRIDELCLNSAGCDFASLPKTL
KDKGPKWSAEVFNKVTNLVSRLESLKSDINALRDMPIFSDVDDEIVEVKQTYGEFDNADD
FLEAFDNLVGASSNQQEALDIIINRPRDLTRKGLIELQEWFDNQNFNDSTLRSAWKTAKN
QDIAAKLIGHIRRASMGDALMPFEQRVDLALERIKAANDWNDEQLSWLDRLASSIKDKVV
LDEDTFKTGNYKRKGGKRKLMNVFNDELDSILTQFNEFMWDEPA
NT seq 3555 nt   +upstreamnt  +downstreamnt
atggctagttccaactttgaatttctgaaaggtgtgaatgatttcctattcgccatcgcc
cgtgcagcagaaaaaaactaccctgatgacccaaacaccaccttggttaagttgcgtgta
tttggcgaagcgacggctaaacacctcgccaaactgcttgatatcgatatccctgataat
caaaacgatctcctacgtgagctgggtaaaatcccctttgttgatgatgctattcttggc
gtgtttcataagctgcgtaaaattggcaaccaagcggtacatgaataccataacgaccta
gacgatgcggcaatgtgccttcgcttagccttccgtttagcggtttggtattaccgtttg
gtcaccaaaaattatgattttgcggttcctgaatttgtgcttccaacgtcgcaaagcggc
gagcagtttgagcaagagattctgtcgctaaagcacgaacttgaattagccaagcagtca
gaaacacagaccaaagcagaagttgaagcacaaaaggccaagctcactgcacttaatggc
tacatctcggtcttagaaagtaaacaagaagaaacccaagagcagtcagaagctcgtatt
gcagcgctaaccgctaagcttaaagagaaagaagctgagctttcagccaagacagaggta
gaacgcaaagcctaccgtaagcaaattgccaacgaggcaagccagcgctcactaaactta
gatgaagccgaaacccgctatttaattgatgctcagcttcgcaaagcgggctgggatgcc
gacaccaacaatctgaaattctcaaagggtaccagaccagaagtcgggcgtaacatggcg
attgcagaatggccaaccagtggtgatgagacgggcaagaccggcttcgctgattatgta
ctgtttgttgggttaaaacccattgccgtggtcgaggccaagcagcaaaacaaagatgtg
gcagcaaaactcaccgaagcctaccgttacagcaaatattttgagcacgacttgttgcgc
agtgaattggaagctcttgcgagtgaccaagaacagcttgataaagtggccgaagccatt
cctaagtatatccacacttggaatgacagcggtgcaggtgaaacgtataaagtgcctttc
tgtttctcggccaacggtcgtgattaccgcgcggcggtaaaaaccaaaagtggtatttgg
tatcgcgatgtacgtcatgccaccaatatgcccaaagcattgccagaatggcaccgtcct
gaagagctgctcgctaagcttgaagacgatgttcattaccaaaacagctggttcagccag
aacgcagatatgagcgacttgggcttgcgttattaccaggaagaagccgtgcaagcggta
gaaacagccatagttgcaggccagcaagacatcttacttgccatggcgaccggtacgggt
aaaacgcgcaccgcgattgcgcttatgtatcgattaattcagtcacagcgttttaagcgt
gtactcttcttagtggatagaacctcactgggtaagcaggcgctagactcgtttgaagac
accaacatcaaaggcgatacctttaacgccatcttcaacattaaagggttaaccgaccgt
ttccctgaggacagcaccaaaatccatgttgccacggttcaatcactggttaaacgcaca
ttacagagtgatgaagtgatgcctgtcggccgttacgactgcatcattgttgatgaagcg
caccgtggatacatactcgataaagaacaaaccgaaggggaagagaagtttcgtaatctg
caagactttatctcttcttaccgtcgtattattgatcactttgatgcggtcaaagtcgcg
ctgaccgcaacgccagcgttgcacaccattgacatctttggtggagagcagcagaagccc
gtttatcgttacagctatcgtaaggcggtgattgatggctacctgtgtgaccaagaacca
ccgattaacatcatcaccaaactcagccaagacgggctttacctgtcgaagggcaccgaa
gttcagcgtttatccaatcaaggtgagctgctcaatgatcagcttgaagatgaacaaggc
tttgaagttgccgatttcaaccgtaccttaatcgcctcgaacttcaataaagtggtgtgt
gaagagctgaccaatcatatcgatccggttaaccatattgatccagcgaacccgcaaaaa
accttagtcttctgtgtgaataacacccatgcggacatggtggtggaagagctgcgtact
gcatttaaggctaaataccctcagcttgagcacgacgccatcattaaaatcaccggtgat
gcagataaagatgccaccaaagtccaatccatgatcactcgctttaacaaagagcgttta
ccaaacattgtagtcacggtggatttgctcaccactggtatcgatattccaagcatttgt
aatttagtgtttatgcgtaaggttcgcagccgaattctctatgaacagatgaaaggccgt
gcgactcgcttatgtccacaagcgggtaaaacctcattccgtatttttgatgcggtcgat
ctctattctacgctgcaaagtgtcgataccatgcgcccggtggtggtgcgcccccaagtg
gaattgcaaacactggttaacgaaattacggactcagaaacctataaaaccatcgaagcc
gatggccgcagttttgcagagcatagccatgaacagctggtgtctaagttgcagcgcatt
gttagccatgcccaatttaaccgcaataaatccaaaccagtggatgagcacattaaacgc
attgacgaactgtgcttaaacagtgcagggtgtgattttgccagcttaccgaaaaccctt
aaagacaaagggccaaaatggtcggcagaagtgtttaacaaggtgaccaacttagtcagt
cgcttagagagcttaaagagtgacattaacgctctgcgtgatatgccgatcttctctgat
gtcgatgatgaaattgtcgaagtgaaacaaacctatggcgagttcgataatgcggatgac
ttcttggaagcgtttgataacttggtcggagcctcaagcaaccagcaagaagcgctcgat
attattatcaatcgaccacgggatttgacccgtaaaggattgattgaactgcaagaatgg
tttgataaccaaaacttcaatgattcgaccctgcgcagcgcatggaaaacagccaagaac
caagacatagccgccaagcttattggtcatattcgccgcgcctcgatgggtgacgcgctg
atgccgtttgaacaacgtgtcgatctagcattagagcgtattaaagccgccaacgactgg
aatgacgagcaactcagctggttagatcgcttagcctcatcaatcaaagacaaagtggta
ctcgatgaagacacctttaaaacgggtaactacaagcgcaaagggggcaaacgtaagctg
atgaacgtcttcaatgacgaattagacagcatactgacccaattcaacgagtttatgtgg
gatgagcctgcgtaa

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