Vibrio neptunius: KW548_12130
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Entry
KW548_12130 CDS
T08906
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
vnp
Vibrio neptunius
Brite
KEGG Orthology (KO) [BR:
vnp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
vnp01002
]
KW548_12130
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vnp01011
]
KW548_12130
Peptidases and inhibitors [BR:
vnp01002
]
Cysteine peptidases
Family C82
KW548_12130
Peptidoglycan biosynthesis and degradation proteins [BR:
vnp01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
KW548_12130
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
Bunya_nucleocap
Motif
Other DBs
NCBI-ProteinID:
QXX05896
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Position
1:complement(2544751..2546304)
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AA seq
517 aa
AA seq
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MARLNPLLLLLIMIPLPTWASSYFERIGWLEPDNHVLRVLQYSQDVEHIYQSNHNQLIWF
DLQQSTRLEFQLEIITSAGFSPLFSRQLRYLEYYRKSNRWHEYDLLATDTLLLYISYAEQ
AKVLGYYWFFESKLYKPLPRLNQSDLIAVSVAVEYQQLSELIEAYTPDSDDYQELIDSYL
HVVKFEELNLPKYKQKGLRQRGGTLKNREVLLLRMEMVDVDLSNVRRDIDWYDVTLEAAV
RQFQQLHGLTQDGVIGPDTIRWLNTSPTERLSILALNAERSRLWPIERDTIIVVNVPGFD
MKYWYSGQEVFESKVVVGRRARPTPMMTINLDSLILNPTWNVPWKIMVEDIIPKVKEDPE
YLIRQNITIVPKWGSKEQINPEDIDWHNLRPSAFPYRMTQLSGDKNALGLYKFNTPNRRA
IFLHDTPSKNLFDEASRAFSSGCIRVEHADQFASLLLKSQGLDMSTLEQEEIAANKAIPL
KQRVPVHIIYQTAWSEGGKVHYRDDIYRWDRFSYGKG
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atggctagacttaacccccttctattactgctgatcatgattcctctaccaacttgggcc
agtagttactttgagcgtattggttggttggaaccggataatcacgtccttcgggtgctg
caatattcccaagatgttgaacacatttatcagagcaatcacaaccagttgatctggttt
gatcttcaacagagtactcggcttgaattccaacttgaaatcatcaccagtgcagggttc
agcccactgttttctcgtcagttgagataccttgagtactaccgaaaaagtaatcgctgg
catgaatatgatcttctcgcgacggacaccttactactctatattagctacgctgagcaa
gccaaggtgctgggttactattggtttttcgaatccaagctctacaaacctttaccaagg
ttgaatcagtcggatttgatcgcggtttccgttgccgttgagtatcagcagctcagtgag
ctcatcgaagcctatacccctgacagtgacgactatcaggagctgattgacagctatttg
catgtggtcaagtttgaagagctgaacctccctaaatacaaacaaaaagggttaaggcaa
agaggaggcacgctcaaaaatagagaggtattgttacttagaatggagatggtggacgtc
gatctatctaatgtacggcgagatattgattggtatgacgtgacattggaagcggcggtc
aggcagtttcagcagctccatggcttaacgcaagatggggtgattggccctgacacgatt
cggtggctaaacaccagcccaactgagcggctgtctattttggcgctcaatgcagagcgg
agtcggttgtggcccattgaacgtgacaccattatagtcgtgaatgtgccgggctttgac
atgaaatattggtattcaggccaggaggtgtttgaatctaaggtggtggttggacgaaga
gcgagacccacgcctatgatgaccattaacttagactcgctcattctcaatccgacatgg
aatgttccatggaaaatcatggtagaagacatcattcccaaggtaaaagaagacccggag
tatttgatcaggcagaatattacgattgtgcccaagtgggggtcaaaagagcagatcaat
cccgaagatattgattggcataacctgcggccgagtgcgtttccttatcggatgacgcag
ctatcaggtgataaaaatgccttgggtttgtataagtttaacacaccaaaccggcgtgct
atctttctccacgatacaccgagtaaaaacttgtttgatgaagcaagtcgagcgttcagt
tcgggctgtattcgggtcgaacacgccgatcaatttgcttctcttctactaaagagtcag
gggctggatatgtcgaccttagagcaagaggaaatcgctgcaaacaaagcgattccgctc
aaacagcgagtcccggtacatattatttatcagacggcatggtcagaaggtggcaaggtt
cattaccgggacgatatttaccgttgggatcggtttagttacggcaaagggtga
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