Vibrio neptunius: KW548_14035
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Entry
KW548_14035 CDS
T08906
Name
(GenBank) LysR family transcriptional regulator
KO
K10918
LysR family transcriptional regulator, transcriptional activator AphB
Organism
vnp
Vibrio neptunius
Pathway
vnp05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vnp00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
KW548_14035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vnp03000
]
KW548_14035
Transcription factors [BR:
vnp03000
]
Prokaryotic type
Helix-turn-helix
LysR family
KW548_14035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
Motif
Other DBs
NCBI-ProteinID:
QXX06207
LinkDB
All DBs
Position
1:3005292..3006167
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AA seq
291 aa
AA seq
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MKLDDLNLFRLVVENGSYTATSRKTMIPVATITRRIQALEEALNLRLLNRHARKLSLTEA
GERFYNECSPLLNRLTLAAEEITDECRGAAGKIRISAPSNLTKRMMMPMFNEFMTHYPDI
NIELTTSNHADQLDPTEWDVIFRVGPQRDSSLIARKISSVEDILVASPIYLKNNPAPKHA
EDLHTHPLLKGAPLLKWQLTNASGETVVNNDKGRFQANTLDVVRSACSDGLGITLMPDAM
LKEYLQDGSLVRVLEEWSANPRDIYMLYNHKDHLPEKVRLFIDFVIAYNIH
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgaaattagacgatctcaacctgtttaggctagttgtggaaaatgggagctataccgcc
acgtctcgtaagacgatgattcccgttgctacaatcactcgacgcatacaagcgttggaa
gaggctctaaaccttagactgctcaatcgccatgctcgtaagctttctctcacggaagcc
ggcgaacgtttttacaatgaatgctctccgctactcaacagactgaccctagccgctgaa
gagatcactgacgaatgtcgtggcgctgcgggtaaaattcgaatttcagcaccctctaac
ctcactaagagaatgatgatgccgatgttcaatgagttcatgacgcattatccggacatt
aatattgagctcactaccagtaaccatgcagatcagctcgacccaacagaatgggacgtc
atattccgtgttggcccgcaacgagattcaagcctcattgctcgtaaaatcagttctgtt
gaagatatcttggttgccagcccaatttatttgaaaaataacccagccccaaaacatgcc
gaagatttacacacccacccgctgttgaaaggtgcccctctcctcaaatggcaactgact
aacgccagtggagaaaccgttgtaaataatgataaaggacgttttcaagcaaacacccta
gacgtggtacgcagtgcatgctcagatggcttgggtataacgcttatgcctgatgcgatg
cttaaggagtacctccaagatggcagtttagtgcgggttcttgaagagtggagcgcaaac
ccacgagatatctacatgttgtataaccacaaagaccacctaccagaaaaagtacgcttg
ttcatcgactttgtgatcgcttacaacatccattga
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