Vibrio neptunius: KW548_14165
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Entry
KW548_14165 CDS
T08906
Name
(GenBank) RNA polymerase sigma factor FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
vnp
Vibrio neptunius
Pathway
vnp02020
Two-component system
vnp02040
Flagellar assembly
vnp05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vnp00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
KW548_14165
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
KW548_14165
09142 Cell motility
02040 Flagellar assembly
KW548_14165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vnp03021
]
KW548_14165
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
vnp02035
]
KW548_14165
Transcription machinery [BR:
vnp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KW548_14165
Bacterial motility proteins [BR:
vnp02035
]
Flagellar system
Flagellar assembly proteins
Stator
KW548_14165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
UPF0122
HTH_23
HTH_10
Rv2175c_wHTH
GerE
MarR_2
Ino80_Iec3
Motif
Other DBs
NCBI-ProteinID:
QXX06230
LinkDB
All DBs
Position
1:complement(3030982..3031716)
Genome browser
AA seq
244 aa
AA seq
DB search
MNKALTYDQYANQNSQRAFLEKYSVLVKRIAHHLLGRLPPSVQVEDLIQAGMIGLLEAQK
NYDGSKGASFETYAGIRIRGAMLDDIRRGDWVPRSVHKNSREISQAIAQLEGELNRDPTD
AEVAKRLDMTLDQYHSALTDINSSRLIGIDDLGVSEDAISHEDADEENIPFQGVADEYFR
TALVESIKSLPEREALVLSLYYDEELNLKEIGEVIGVSESRVSQILSQSMQRLRTKLSVW
TNND
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaggcattgacctatgaccaatacgcaaatcaaaacagccagcgagcattttta
gaaaaatactcggtactggttaagcgcattgcacaccatttgcttggacgattacccccg
agcgtgcaggttgaagaccttattcaagctggaatgatcggcttgttggaagctcaaaag
aattacgatggcagcaaaggtgccagttttgaaacctatgctggtattcgcattcgtggt
gctatgctagatgatatacgccgaggggattgggtccctcgctccgtacacaaaaacagt
cgagaaatcagtcaggcgattgcgcagttagaaggtgagctcaatcgtgatccgacagat
gcagaggttgccaagcgtttggatatgactctcgatcaataccacagtgcactaacagat
ataaacagttcacgtctcattggtattgacgatttaggtgtgtcagaagatgcgatatcg
cacgaagatgctgacgaagaaaatatcccttttcagggcgtcgcagatgaatattttcgt
acagcactggtagaatcaattaaatcacttcctgaaagagaagctctagtactttcgctt
tattatgatgaagagttaaacttgaaggaaatcggcgaagttattggtgttagcgagtcg
cgcgttagccaaatactaagccaatcaatgcagcgtctacgcactaagttgagtgtttgg
acaaataatgactag
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integrated database retrieval system
