Vibrio neptunius: KW548_15765
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Entry
KW548_15765 CDS
T08906
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
vnp
Vibrio neptunius
Pathway
vnp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vnp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KW548_15765 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vnp03019
]
KW548_15765 (pnp)
03016 Transfer RNA biogenesis [BR:
vnp03016
]
KW548_15765 (pnp)
Enzymes [BR:
vnp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
KW548_15765 (pnp)
Messenger RNA biogenesis [BR:
vnp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
KW548_15765 (pnp)
Transfer RNA biogenesis [BR:
vnp03016
]
Prokaryotic type
tRNA degradation factors
KW548_15765 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
RNase_PH_C
KH_1
OB_RRP5_4th
S1_RRP5
KH_2
KH-I_KHDC4-BBP
KH_SLS1_2
DUF3016
S1_2
Motif
Other DBs
NCBI-ProteinID:
QXX06489
LinkDB
All DBs
Position
1:complement(3398469..3400601)
Genome browser
AA seq
710 aa
AA seq
DB search
MFEKPVVKTFQYGNHTVTLETGVIARQATAAVMVTMDDTAVFVSVVGKKEAVEGQDFFPL
TVNYQERTYAAGKIPGGFFKREGRPSEGETLTARLIDRPIRPLFPDAFKNEVQVIATVVS
VNPDVQPDIVTMIGTSAALAISGIPFNGPIGAARVGHIDGQLVLNPSTTELETSKLDLVV
AGTEGAVLMVESEADNLTEEEMLSAVVYGHDQQQVVINAINEFKAEVATPAWDWVAPEEN
TTLVNKIAELAEAKLVEAYQITEKMARYDRIHEIAGEVNEVLLAEDPEANTKEIHTIFHD
LEKTVVRRSIIAGNPRIDGREKDMVRALDVRTGVLPRTHGSSLFTRGETQALVTATLGTQ
RDAQIIDELTGERKDHFLLHYNFPPYCVGETGFVGSPKRREIGHGKLAKRGIAAVMPSVD
EFPYTVRVVSEITESNGSSSMASVCGTSLALMDAGVPIKSSVAGIAMGLVKEGDDFVVLS
DILGDEDHLGDMDFKVAGTNTGITALQMDIKIEGITKEIMQIALNQAQGARKHILSVMDE
AISGAREDISEFAPRIHTMKISAEKIKDVIGKGGAVIRALTEETGTTIEIEDDGTIKIAA
TEGTAAKEAIRRIEEITAEVEVGRIYTGKVARLADFGAFVTILPGKDGLVHISQIADKRV
EKVSDYLAEGQEVQVKVLEIDRQGRVRLSMKEAVEKTEEAVSEEKPATDA
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgttcgaaaaaccagttgttaaaacgttccagtacggtaaccacacagttactctagaa
actggcgttattgcacgtcaagctacagcagcagttatggtaacaatggatgatactgcg
gtattcgtatctgttgtaggtaaaaaagaagcggtagaaggtcaagacttcttccctcta
acggttaactaccaagagcgcacttacgctgcgggtaaaatccctggtggtttctttaaa
cgtgaaggtcgcccttctgaaggtgaaacgctaacggctcgtctaatcgaccgtccaatc
cgtccacttttcccagatgcattcaaaaacgaagttcaagttatcgcgacagttgtgtct
gtaaacccagacgttcaacctgacatcgtaactatgattggtacgtcagcggcacttgct
atttctggtatcccgttcaacggtcctatcggtgcggcacgtgttggtcacatcgacggt
caacttgttcttaacccaagcaccactgaactagaaacatctaaactagacctagttgtt
gcgggtactgaaggcgctgttcttatggttgagtcagaagctgacaacctaactgaagaa
gagatgctatctgctgttgtttacggtcacgatcaacagcaagttgtgatcaatgcgatc
aacgaattcaaagcggaagtggctactcctgcttgggattgggttgctccagaagagaac
acaacgcttgtaaacaagatcgctgaacttgctgaagctaagctagttgaagcttaccaa
atcactgagaagatggctcgttacgaccgcatccacgagattgctggtgaagtaaacgaa
gttcttcttgctgaagatccagaagcaaacacaaaagaaatccacactatcttccacgat
ctagagaagacagtggtacgtcgcagcatcatcgctggtaacccacgtatcgacggtcgt
gaaaaagatatggttcgtgcgctagacgtacgcactggtgttcttccacgtactcacggt
tcatcgctattcactcgaggtgaaactcaggcgcttgtaactgcgactctaggtacgcag
cgtgatgctcaaatcatcgacgagctaacgggtgagcgtaaagatcacttcctactgcac
tacaacttccctccatactgtgtaggtgagactggttttgtaggttctcctaagcgtcgt
gaaatcggccatggcaaactagctaagcgtggtattgctgcagtaatgccatctgtagac
gagttcccatacacagtacgtgtggtatcagaaatcactgaatctaacggctcttcttca
atggcttctgtatgtggtacgtctctagcgcttatggatgctggtgtgccaatcaagtct
tctgttgcgggtatcgcaatgggtcttgttaaagaaggcgatgatttcgttgttctttct
gacatcctgggtgacgaagaccacctaggtgacatggacttcaaagtagcaggtactaac
actggtatcactgcacttcagatggatatcaaaatcgaaggtatcactaaagagatcatg
caaattgcgcttaaccaagctcaaggtgcacgtaagcacatcctatctgtaatggatgaa
gctatctctggcgctcgtgaagatatctctgagttcgctccgcgtattcacacaatgaag
atcagcgctgagaagatcaaagacgttatcggtaaaggtggtgcagttatccgtgctctt
actgaagagacgggtacaactatcgaaatcgaagacgacggtacaatcaagattgctgca
actgaaggtacagctgcgaaagaagcaatccgtcgtatcgaagagatcacggcagaagtt
gaagttggccgcatctacacaggtaaagtagcgcgtctagcagactttggtgcattcgta
actatcctgccaggtaaagatggcctagtacacatctctcaaatcgcagacaagcgtgtt
gaaaaagtgtctgactacctagctgaaggtcaagaagttcaagttaaagtccttgaaatc
gaccgtcagggccgtgtacgtctaagcatgaaagaagcagttgaaaagactgaagaagcg
gtttctgaagagaaaccagcaacagacgcataa
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