Vibrio neptunius: KW548_19280
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Entry
KW548_19280 CDS
T08906
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
vnp
Vibrio neptunius
Brite
KEGG Orthology (KO) [BR:
vnp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vnp03400
]
KW548_19280 (phrB)
Enzymes [BR:
vnp01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
KW548_19280 (phrB)
DNA repair and recombination proteins [BR:
vnp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
KW548_19280 (phrB)
Prokaryotic type
KW548_19280 (phrB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
QXX09203
LinkDB
All DBs
Position
2:complement(594981..596396)
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AA seq
471 aa
AA seq
DB search
MNLVWLRRDLRVEDNSALINAIEVGEPVVCIYVATPMTWQDHGLAPIQADLIYRRLQALK
RDLESLCIPLLYAQVDTFAESAERVAEVASLVNANRVFVNAEYEVNEQRRDAVLKSCLHN
TAIHFESSDDKCLFAPGSVVNKQGSYFKVFTPFKKAYLAKLGECSFQVRKPQAVSSGVLP
ENLKPLVLTDDVNFSYPRDSSAQFAADTQSIIQKLRDFDSQDVETYAKNRDFPAIAGTSQ
LSPYLAIGALSVRQCMARLMFGQPLPLSEGREVWQSELIWREFYQHLIHFEAKLSKGKSF
SDWGERLLWHNEQLHIEAWKKGQTGFPIVDAAMRQLNQTGWMHNRLRMIVASFLTKDLHV
DWRIGERYFMNKLVDGDYAANNGGWQWCASTGCDGQPYFRIFNPITQGERFDPNGDFVRQ
WIPELSQVPDKFVHQPWKWSGVRSLSYPPPIVDHKAEREVTLRLYKEAKDA
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttgtatggctgagacgcgatttaagagttgaagacaattctgcgctcattaat
gcgatagaagttggtgagccggttgtctgtatttacgttgcaacccctatgacttggcaa
gatcacggtctagcgcctattcaagcggatttgatttaccgtcggttgcaggcattgaag
cgcgacctagagtctttgtgcataccactactttacgctcaagtggacacatttgctgag
agcgcagagcgtgtcgcggaggttgccagtttggtcaatgcgaatcgggtgtttgtcaac
gcggaatatgaagtgaatgagcagcgtcgtgatgctgttcttaaatcgtgcctccacaat
actgccattcactttgagtctagtgatgacaaatgtctttttgcacctggcagtgtagtg
aacaagcaaggcagctatttcaaggtgtttacgccgttcaagaaggcctacctggctaaa
ctcggtgagtgctcgtttcaagttcggaagccacaagcggtgtcttcaggggtattgcct
gagaacttgaagcctctagtattgactgatgatgtcaactttagttacccgcgagactca
agtgctcaatttgccgcagatacccaatcgataatccaaaagctgagagactttgatagc
caagatgtagaaacttatgccaaaaaccgagactttcccgccattgctggaaccagccag
ctgtccccttacttagctatcggtgcactatctgtacgtcaatgtatggctcggttgatg
tttggtcagcctctgccgctcagcgaagggagagaagtatggcaaagtgagttgatatgg
cgtgaattctatcaacacctcattcatttcgaagctaagctgagtaaaggaaagtctttt
tctgactggggggaacgcttgctgtggcataacgaacagctacatatcgaggcgtggaag
aaaggccaaaccggctttcctatcgtagatgcagccatgaggcaactcaaccaaacgggg
tggatgcacaatcggctaagaatgatcgtggcgagctttttgaccaaagatctccatgtt
gattggagaatcggtgaacgctattttatgaacaagttggtagatggggattatgcagcg
aacaatggcggctggcagtggtgtgcctcaaccggatgtgacggtcagccatacttccgc
atttttaaccccattacccaaggtgaaaggtttgatcccaatggagattttgtgcgtcag
tggatccctgaattgtctcaagtgccggataaattcgttcaccaaccctggaaatggagt
ggtgtaagaagcttgtcatatccgccgccaatagttgatcataaggcagaaagagaagta
accttacggctctataaggaagcgaaggacgcttag
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