KEGG   Vibrio neptunius: KW548_23715
Entry
KW548_23715       CDS       T08906                                 
Symbol
tssM
Name
(GenBank) type VI secretion system membrane subunit TssM
  KO
K11891  type VI secretion system protein ImpL
Organism
vnp  Vibrio neptunius
Pathway
vnp03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:vnp00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    KW548_23715 (tssM)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vnp02044]
    KW548_23715 (tssM)
Secretion system [BR:vnp02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   KW548_23715 (tssM)
SSDB
Motif
Pfam: IcmF-related_N IcmF-related IcmF_C IcmF_helical DUF4885 DUF3208
Other DBs
NCBI-ProteinID: QXX08603
LinkDB
Position
2:complement(1535828..1539223)
AA seq 1131 aa
MLKNIIRHPIFISSLLAIVLVGVLTALHLLYPDTISEPILYFGIGIVALAFCAYQIVLFV
KKRKQSREQQLETEEEALSLVLRPLLISSKKKPIYLMIGNKSAGKKQFLFSSNAIKSIDT
ARTTKNDFFEWYESDEAIYLKPDQRLVFQEVSAADSLLWDAMVSEVIRNRPRKPFAGCLF
FTDIEFLIISEEEQVDYALTALIERITSICERTNTALPVYMVMSKLDKLQGFKEYVQLSP
LKHNVEYLSIPLKDSKGILVDYYRDSFNNLVKVIEQNALDSTSQSNDTKEKQAILSFPKQ
LEICQKEIEYVVQRLSEVNRGAYFLDLREMFFSSCLQGGRKYNLLAKSCSTYFNLPIIAS
EHTQLSETPYFTRFLVESQILPEADFAGENKTYLKRILRQSRLAMVASIVFLAGGAYMLG
TTLDSNLRVIYQLLNIETDDRAANSGRLLDDKLARAIAQIQPVYGAWVEGSEALDQELVS
LNVSRLEPTTKMAYQTLLNSIQQELIPVIEQSYRVQLTKYQDKPIQALPVLKGYLMLKEP
SKRDLPFMTAQTQLTLSKVIGNSEQVNDAMKFLNAYFRTDFEPVNINMDIVRATRRSLLS
QSNVDLVYAQLINQANTIDLGTLNIERAVGFDFNNIFNDQIDQELLDISKVYTATGFSTF
YRPRVDLMSKDVITNNWVLGLSKNVTPSKEEHEAFKDQIRKKYTDDYISYWRNALSELKV
KKYDSIGDLTNAIDLVSGPSSPLTTVLKQVYSNTHFSPVGEKELLANKLPKVATEAIDKL
TDSAEELVQPDYLLMQRVEQAFFQLNQLQINETPNSPTPWDEIVTALSRLRTYMKDIADS
PDPQMASLLAARSRMQSSEADPIIRLKQIAQKSPEPVRSWLLGMVQQSWSVMITESAKGV
QSQWYSDVYTKYRDLALNKYPFDLNAEEEIALEDFELLFATGGIIDTFVQNNLASFYDTN
LWTPKRVDGETMPLTPELLVQLKNYNVIRDTLINKSTNRVSIPFSTKILDLDSSAIRATV
KVADSQMSYYHGPSRIRELEWPPKSGDFNVSITIQDVTDEGKQYVLSKNGQWAIYRLLGQ
STLTNQHDGSFVSDITVSGRDLKLRVKPLSQRNPFTLAELYNFSLPETINL
NT seq 3396 nt   +upstreamnt  +downstreamnt
atgttaaaaaatataatacgtcatccgatattcatatcttcgctacttgctatcgtttta
gtcggtgttttaacagcgttacacttgttatacccagataccatttctgagcctatctta
tatttcggtatcggcatcgttgcattggcattttgtgcttatcaaatcgtacttttcgtt
aagaagagaaaacaaagtagagaacagcaactagaaacagaagaagaagctttaagttta
gtcttgagaccattgctaatcagctccaagaaaaaaccaatttatctgatgattggtaac
aaatcagcgggtaagaagcagttcctattcagttcaaatgcaatcaaatcgattgatact
gctcgtacgacaaaaaacgactttttcgaatggtatgaatctgacgaagccatctattta
aaacctgaccagcgtttagtgttccaggaagtctccgccgcagactctctgctctgggat
gcgatggtgtcagaggtcattcgaaatcgcccacgtaaaccctttgctggctgtctgttc
tttacagacatagagtttttgattatttcggaagaagaacaggtcgattacgctcttacc
gctttgattgaacgcattacctctatctgcgagcgcaccaatacggcactgcctgtgtac
atggtgatgtcgaagctggataagcttcaaggtttcaaagagtatgtgcagcttagccct
ctaaaacacaatgtcgaatatctatccatcccacttaaggattcgaaaggtatcttagtt
gactactaccgtgatagcttcaacaacttagtcaaagtcattgagcaaaacgcactagac
tcaacgtctcagtctaatgacaccaaagaaaaacaagccattctgtcattcccaaaacag
ttggaaatctgtcagaaagagatcgagtatgtcgttcagagattaagtgaagtcaaccgc
ggggcatactttcttgatctacgagagatgttcttttcttcttgcctgcaagggggaaga
aagtacaacttacttgccaaaagctgcagtacttactttaacttgcctattatcgcgtct
gagcacactcaattatctgaaacaccgtatttcacgcgttttcttgtcgagtctcaaatt
ttaccagaagccgattttgctggtgagaacaaaacctacctgaagagaatactgcgccag
agccgattggctatggtggcttctatcgtattcttggcgggcggagcatacatgcttggt
acgacactagacagcaatctaagagttatctaccagctattgaacattgagactgacgat
cgagcagcaaactcaggtcgcttacttgatgataaactcgctcgtgccattgctcagatt
cagccagtgtatggcgcatgggttgaaggtagtgaggccctagaccaagaactagtatcc
cttaatgtcagccgcctagagccaacaaccaagatggcatatcaaacactgctcaactca
attcagcaagaattgataccagtgatcgaacaatcgtatcgtgttcagttaactaagtac
caagacaagccgattcaagcgcttcctgtcctaaaaggatacttaatgttgaaagaaccg
agcaagcgtgatttgccctttatgacggcgcagactcaattaactctttcaaaggtgatt
ggcaactcagaacaagtgaatgacgcgatgaagtttcttaatgcttacttcagaacagac
ttcgagccagtcaatatcaacatggacattgtacgggccactcgtcgcagcctattgtca
caatcaaacgttgatttggtttatgcgcagttaatcaaccaagcaaacactatagacttg
ggcacgttgaacattgaacgcgctgttggtttcgacttcaataacatctttaatgatcaa
atcgaccaggagctccttgatattagcaaagtgtataccgcgacaggtttcagcactttc
tatcgtcctcgtgttgatctgatgtcaaaagatgtcatcaccaacaactgggtattgggt
ctatctaagaatgtcacgccaagcaaagaagagcatgaagcatttaaagatcaaatccgt
aaaaaatacacggacgactacattagttactggcgcaatgcgctgagtgaacttaaggtg
aaaaaatacgactcgattggcgatttgaccaacgctatcgatctggtttctggtccatcc
tcaccattgaccacggtattgaagcaagtctactccaatactcacttttctccagtaggc
gaaaaagagctgctcgcaaacaaattgccaaaagtcgccacagaagcgatcgacaaactc
acagattcagcagaagagcttgttcaacctgactacctgttaatgcagcgtgtcgaacaa
gcgttctttcaactgaaccagttacagatcaatgaaacgcctaactcccctactccgtgg
gatgaaattgtgactgcgttgagccgtttgcgaacctacatgaaagatatcgctgactca
ccggatccacaaatggcatcgctcttggcagcgcgatcacgcatgcaaagctcagaagcc
gatccaattattcgtttgaaacagatcgcacaaaaatcaccagagcctgtgcgtagctgg
ttattaggaatggttcagcaaagctggtctgtgatgatcacagagtcagctaaaggcgtt
caaagtcaatggtatagtgatgtctatacaaaatatcgtgatttggctctgaataagtat
ccattcgatttaaatgctgaagaagagattgcactagaagattttgagctgttattcgct
acaggtggcataattgataccttcgtccaaaacaatctagcatcgttttacgatactaac
ctttggacaccaaagcgtgtcgatggtgaaaccatgccattaacaccagaacttctggtt
caacttaaaaactacaatgtgatacgcgacactttaatcaacaagagtaccaaccgtgtc
tcgataccatttagtaccaagattctcgacttagactctagcgctattcgtgcaaccgtt
aaagtcgcagattctcaaatgagctactaccacggtccaagtcgcattagggaactggaa
tggccacctaagagcggcgacttcaacgtgagtattactatccaagacgtaactgatgag
ggcaaacaatacgtactaagcaaaaatggccagtgggcaatctacaggctattaggccaa
tccacactaactaatcaacatgatggaagttttgttagtgatattaccgtttcaggtcgt
gacttgaaactacgagtgaagccactctcgcaaaggaacccatttaccttagcggagcta
tataacttctctctacccgaaaccatcaacctataa

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