Vibrio neptunius: KW548_23850
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Entry
KW548_23850 CDS
T08906
Symbol
nrdD
Name
(GenBank) anaerobic ribonucleoside-triphosphate reductase
KO
K21636
ribonucleoside-triphosphate reductase (formate) [EC:
1.1.98.6
]
Organism
vnp
Vibrio neptunius
Pathway
vnp00230
Purine metabolism
vnp00240
Pyrimidine metabolism
vnp01100
Metabolic pathways
vnp01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
vnp00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
KW548_23850 (nrdD)
00240 Pyrimidine metabolism
KW548_23850 (nrdD)
Enzymes [BR:
vnp01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.98 With other, known, physiological acceptors
1.1.98.6 ribonucleoside-triphosphate reductase (formate)
KW548_23850 (nrdD)
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Motif
Pfam:
NRDD
Gly_radical
ATP-cone
Zn_ribbon_TiaS
DUF7129
Zn_Tnp_IS91
Motif
Other DBs
NCBI-ProteinID:
QXX08622
LinkDB
All DBs
Position
2:1570518..1572638
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AA seq
706 aa
AA seq
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MKPIVIKRDGSRAPFSRDRIQAAVEAAAEHVDKEIAIYALNVALAVELQLKDHDEVHITE
IQTLVENELMQGPYKSLARSYIEYRHDRDIAREKQSVLTREIEGLIEESNVDLINENANK
DGKVIPTQRDLLAGIVAKHYAKTHILPRDIVQAHEQGDIHYHDLDYAPFFPMFNCMLIDL
KGMLTHGFKMGNAEIDTPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLEPYVMASY
EKHLNIAQEWDIHEPEAFARARTEKECYDAFQSLEYEVNTLHTANGQTPFVTFGFGLGTS
WASRLIQQSILKNRIAGLGKNRKTAVFPKLVFGIKDGLNHKADDPHYDIKKLALECASKR
MYPDILNYDKVVEVTGSFKTPMGCRSFLGTYEENSELIHEGRNNLGVVSLNLPRIAIEAK
GDEGKFYQILNTKLELARRALETRIARLENVKARVAPILYMEGACGVRLKADEPIANIFK
HGRASISLGYIGVHETINALYGNQTHVYDNSELRQKALDIIKYLKDKVNQWAEESGYGYS
LYGTPSENLCSRFCRIDTKEFGVLEGVTEKGYYTNSFHLDVEKKVNPYDKIDFEMPYPQI
SSGGFICYGEFPNMQRNVEALENVWDYSYSRVPYYGTNTPIDECYECGYNGEFDCTSKGF
TCPSCGNHDSTKVSVTRRVCGYLGSPDARPFNFGKQEEVKRRVKHL
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaccaatcgtaatcaagcgtgacggctctagagctccgtttagcagggatcgcatt
caggctgctgttgaagcagcggcagagcatgtagataaagaaatcgccatatacgcgcta
aatgtggcgctagcggtggagctgcagcttaaagatcacgatgaagttcatataacggaa
attcaaaccttggtggaaaatgagttaatgcaggggccttataagtcactcgcacgctcg
tacattgagtaccgccatgatcgcgatattgcacgagagaagcaaagcgttttgactcgt
gagatcgaaggattaatcgaagaaagcaatgttgatctgattaacgaaaacgccaataaa
gatggcaaggttattccgacccagcgtgatttactggcggggatagtcgctaagcattac
gccaaaacacacatcttgcctcgcgatattgttcaggcccatgagcaaggcgatattcat
tatcacgatctggactatgcgccgttttttccgatgtttaactgcatgttaatcgattta
aaaggcatgctgacccatggtttcaaaatgggaaatgctgagatagatacgccaaaatca
atttctacagcgaccgcagtgaccgcgcaaatcatcgctcaagtcgccagccatatatac
ggtggcacgacgattaaccgtattgatgaagtgcttgagccttatgttatggccagttac
gaaaagcaccttaacattgctcaggaatgggatattcatgaacctgaagcgtttgcacgc
gcgcgcaccgaaaaagagtgttatgacgcttttcagtctctggaatacgaagtaaatacg
ctgcataccgccaatggccagacaccttttgttaccttcgggtttggtctagggaccagt
tgggcttctcgattgatccaacagtcgattcttaaaaatcgcatcgctggtttaggaaaa
aaccgtaaaacggccgtatttcctaagcttgtcttcggaataaaagatggattgaatcat
aaagccgacgatcctcactatgacattaagaagcttgcacttgagtgtgcatcaaaacgt
atgtacccagacattctcaattacgacaaagtggttgaggtcacgggttcatttaaaaca
ccaatgggatgtcgtagtttcctaggaacctatgaggaaaatagtgagttgatccatgaa
gggcgcaataatctgggcgttgtcagtcttaaccttcctcgaattgcgattgaagcaaaa
ggtgacgagggcaagttttatcagattttgaatacgaagttagaactcgcacgccgtgct
ttagagacacgcattgctaggttagagaacgtgaaagcacgtgttgcgccaattctctat
atggaaggcgcttgtggcgttcgcctaaaggctgatgaacctattgccaacatttttaaa
catggccgcgcgtctatctctttgggttacataggtgttcatgaaacgattaatgcttta
tacggcaatcagacacatgtttatgacaactcagagcttcgacagaaagcgctcgatatc
atcaagtatcttaaagataaggtaaaccaatgggccgaagagtcgggttatggttacagc
ttgtatggtacgcctagtgaaaacttatgtagccgattctgccggattgatacaaaagag
ttcggtgtactggaaggggtcacagagaaaggttactacaccaacagcttccacctcgat
gtagagaagaaggtcaacccatacgacaaaatcgattttgaaatgccttatccgcagatt
tcgagtggtggttttatttgttacggcgagtttccaaatatgcagcgcaatgttgaagca
ttggaaaacgtgtgggactacagctacagccgcgttccttactatgggaccaacacccct
atcgatgaatgttatgaatgtgggtacaacggtgaatttgactgtacgagtaaagggttt
acgtgtcctagctgtggtaatcacgattccactaaagtctctgtaacccggagagtgtgt
ggctatctgggcagtcctgatgcgcggccgttcaactttggtaagcaagaagaagtaaag
cgccgagttaagcatctataa
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