Virgibacillus natechei: OLD84_00065
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Entry
OLD84_00065 CDS
T08602
Symbol
pdxS
Name
(GenBank) pyridoxal 5'-phosphate synthase lyase subunit PdxS
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
vnt
Virgibacillus natechei
Pathway
vnt00750
Vitamin B6 metabolism
vnt01100
Metabolic pathways
vnt01240
Biosynthesis of cofactors
Module
vnt_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
vnt00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
OLD84_00065 (pdxS)
Enzymes [BR:
vnt01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
OLD84_00065 (pdxS)
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Gene cluster
GFIT
Motif
Pfam:
SOR_SNZ
ThiG
Dus
NanE
His_biosynth
NMO
IGPS
TMP-TENI
FMN_dh
TetR_C_27
Motif
Other DBs
NCBI-ProteinID:
UZD13011
LinkDB
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Position
16622..17506
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AA seq
294 aa
AA seq
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MTNRGTERVKRGMAEMQKGGVIMDVVNAEQAKIAEQAGAVAVMALERVPSDIRAAGGVAR
MADPTITEEVMNAVSIPVMAKGRIGHIVEARVLEAMGVDYIDESEVLTPADEVYHLNKSD
YTVPFVCGCRNLGEAARRIGEGASMLRTKGEPGTGNIVEAVSHMREVQSEVRKLSAMSKD
EVMTFAKEIGAPYELLLEIREEGRLPVVNFAAGGIATPSDAALMMELGADGVFVGSGIFK
SDHPEKFAKAIVEATTHYKDYKLISELSKGLGTAMKGLEMSTIEAHDRMQDRSE
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgacgaacagaggtacagaacgtgttaaacgaggaatggcagaaatgcaaaaaggcggc
gtgattatggacgtcgtaaatgcagaacaagcaaaaatcgcagaacaagcaggtgcagtg
gcggttatggcactggaacgcgttccatctgatatacgtgcagcaggaggcgtagcacgt
atggctgatccaacaattacagaagaggtaatgaatgctgtatctattccggttatggca
aaaggacgtattggccatattgttgaagctcgagtcttagaagctatgggtgttgattat
attgatgaaagtgaagtattaacaccagcagatgaggtttatcatcttaataaatctgat
tataccgtaccatttgtctgtggttgtcgtaatttaggagaagcagcacgtcgcattggc
gaaggggcctctatgcttcgtacaaaaggtgagcctggtacagggaatattgtagaagcg
gtgtctcacatgcgagaagtgcaatccgaagttcgtaagttgagtgcaatgtcaaaggat
gaagtgatgacatttgccaaagaaatcggtgcaccatatgagctattattggaaatccgc
gaagagggtcgcttgcctgtggtgaactttgcagcaggtggtattgcaacgccaagtgac
gcagcattaatgatggaattaggtgcagatggtgtatttgtaggatctggaatcttcaaa
tcggatcacccagagaaatttgcaaaagctatcgttgaagcaactacccattataaagac
tataaattaattagtgaactatcaaaaggtcttggtacagcaatgaaaggtcttgaaatg
agcacgattgaagctcatgaccgtatgcaagatcggagtgaataa
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