Virgibacillus natechei: OLD84_00075
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Entry
OLD84_00075 CDS
T08602
Symbol
serS
Name
(GenBank) serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
vnt
Virgibacillus natechei
Pathway
vnt00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
vnt00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
OLD84_00075 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
vnt01007
]
OLD84_00075 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vnt03016
]
OLD84_00075 (serS)
Enzymes [BR:
vnt01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
OLD84_00075 (serS)
Amino acid related enzymes [BR:
vnt01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
OLD84_00075 (serS)
Transfer RNA biogenesis [BR:
vnt03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
OLD84_00075 (serS)
Prokaryotic type
OLD84_00075 (serS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
ERM_helical
Mis12
GCN5L1
ATG17_like
APG6_N
CC149
DUF3450
CCDC113_CCDC96_CC
NPV_P10
PCRF
TMPIT
Motif
Other DBs
NCBI-ProteinID:
UZD13013
LinkDB
All DBs
Position
18656..19930
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AA seq
424 aa
AA seq
DB search
MLDMKLLRHHFEDVKAKLAHRGEDLSDLNKFGELDEKRRKLIAETESLKAKRNEASKQIS
ALKKDKKDAEPAIKEMREVGEQISTLDIELKEIEEKLDSIMLSIPNIPHDSVPIGEDEED
NVEARTWGEAPKFSFEKQPHWDIATNLDILDFERGAKVAGSRFVFYKGLGARLERALLNF
MMDLHADEHGYEEMLPPYMVNRTSMTGTGQLPKFEEDAFRIDDWDYFLVPTAEVPVTNYH
REEILSPEALPKKYVAFSASFRSEAGSAGRDTRGLIRQHQFNKVELVHFAKPEDSYETLE
TLTGNAEKVLQLLNLPYRVMSMCTGDLGFTAAKKYDIEVWIPSQDTYREISSCSNFEDFQ
ARRAGIRFRRDAKGKPEFVHTLNGSGLAIGRTVAAILENYQQEDGSVVVPEVLRAYMGGK
DVIK
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgttagacatgaaacttctacgacatcattttgaagatgtaaaagcaaaactagctcat
cgcggtgaggatttatccgacctgaataagtttggtgagcttgatgaaaaacgccgtaaa
ttaatcgctgaaaccgaaagtctaaaagcgaagcgtaatgaggcatcaaagcaaatttct
gcactgaaaaaagacaaaaaagacgcagaaccagcgatcaaagaaatgcgcgaggttggt
gagcaaatttccacgcttgatatagagctaaaggagattgaagaaaaactggattctatc
atgctatccattccaaatatcccccatgacagtgtaccgattggagaggatgaagaagat
aatgtggaggctcgtacatggggagaggctccgaaattttcttttgaaaaacagcctcat
tgggatatcgcgacgaatcttgatattttggattttgaaagaggagcgaaagtggcggga
agtcgatttgtcttttataaagggcttggcgcaagactagagcgtgcgcttttaaacttc
atgatggatctgcatgcagatgagcatggatatgaagaaatgctgccgccatatatggtg
aatcgtacgagcatgacaggtaccggtcagctgcctaaatttgaagaggatgcctttcgt
atagatgattgggattactttttagttccaacagcagaagttccagtgacaaattaccat
cgcgaggaaattttatccccagaggctttaccgaaaaagtatgttgcattcagtgcaagt
ttccgttcagaagctggatctgccggacgtgatacacgcggattaattcgccagcaccaa
tttaataaagtagagcttgttcattttgcaaaaccagaagactcttatgaaacgctggaa
actttaaccggtaatgcagaaaaagtactacagttgttgaatttaccataccgcgtaatg
agcatgtgcacaggggatttaggatttaccgctgcaaaaaaatatgatattgaagtatgg
atcccaagccaggacacataccgggaaatttcttcttgctcgaattttgaggatttccaa
gcaaggcgtgcaggtattcggttcagaagagatgcaaaaggaaaaccggaatttgttcac
acgcttaacggatccggacttgccattggtcgaacggtagcagctattttggaaaattac
cagcaagaagatggatctgttgtggttccagaggtattgcgtgcttatatgggtgggaag
gatgttattaagtaa
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