Virgibacillus natechei: OLD84_00855
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Entry
OLD84_00855 CDS
T08602
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
vnt
Virgibacillus natechei
Pathway
vnt03030
DNA replication
vnt03430
Mismatch repair
vnt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vnt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OLD84_00855 (holB)
03430 Mismatch repair
OLD84_00855 (holB)
03440 Homologous recombination
OLD84_00855 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vnt03032
]
OLD84_00855 (holB)
03400 DNA repair and recombination proteins [BR:
vnt03400
]
OLD84_00855 (holB)
Enzymes [BR:
vnt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
OLD84_00855 (holB)
DNA replication proteins [BR:
vnt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
OLD84_00855 (holB)
DNA repair and recombination proteins [BR:
vnt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
OLD84_00855 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
AAA
TIP49
RuvB_N
Motif
Other DBs
NCBI-ProteinID:
UZD13161
LinkDB
All DBs
Position
131419..132408
Genome browser
AA seq
329 aa
AA seq
DB search
MKTWSEVAEVQPLASKIITNSIKKDRISHAYLLQGGRGTGKEAIALLLAKDLFCEYKAAA
EPCNACNACKRITSGNHPDVHWIEPEGQSIKIEQIKNLQKEFTYSGLESNKKVYVIKAAD
TLTSNAANRILKFLEEPSKQTTAIMLTENSQWIIPTIRSRCQVIDLQPLNPISFENRLVE
EGMTKANAVLMRALTNNLDDAFAMNDDEWFASARKLMVQLVGVFSNNPEDVFLFIHNHWV
THFKERKEQEQGLDLLLLAFKDILYYHIGNEDSMVFFAANDEVLEKAAMSFSQEKLVTVL
NEILQAKRNLKQNVHPTLVIEQLTLQIQR
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacgtggtctgaagttgcagaggtacaaccattagcaagtaagattattacgaac
agcataaaaaaagaccgcatttctcatgcgtatttgcttcagggcgggcgcggtactggt
aaagaagcgatcgctttattactcgcgaaagatttattttgcgagtataaggcagcggcg
gaaccttgtaatgcgtgtaatgcttgtaagcgtattacttctgggaatcatccggatgtt
cactggatcgagcctgaggggcaatcgattaaaatagaacaaattaaaaacctccaaaaa
gagtttacctattcagggcttgaatccaataagaaagtttatgtgattaaagctgcagat
acattaacatcgaatgccgctaatcggattttgaagtttttggaggagccgagcaagcag
acgacggcgatcatgctgaccgaaaatagtcaatggattatcccgacgattaggtcacgt
tgtcaggtgattgatttacagccgctgaaccccatctcttttgagaaccgtttggtggaa
gaaggaatgacgaaagcaaatgccgttttaatgcgtgcattaacgaataatttagatgat
gcatttgccatgaatgacgatgagtggtttgcttcagcaagaaagttaatggtacaattg
gtaggagtattttcaaataatccagaagatgtatttctgtttattcataatcattgggtg
acacattttaaggaaaggaaagagcaggagcaaggattggatttattgcttttagctttt
aaggatattctttattaccatattggaaacgaagactccatggttttttttgccgcaaat
gatgaagtgctagaaaaagcagcaatgtctttttcacaagaaaaattagtaactgtcttg
aatgaaattttgcaggcaaaaagaaacttgaagcaaaatgttcatcctacattagtgatt
gaacagcttacacttcaaatacagaggtga
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