Virgibacillus natechei: OLD84_01520
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Entry
OLD84_01520 CDS
T08602
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
vnt
Virgibacillus natechei
Pathway
vnt03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
vnt00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
OLD84_01520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vnt03021
]
OLD84_01520
03400 DNA repair and recombination proteins [BR:
vnt03400
]
OLD84_01520
Enzymes [BR:
vnt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
OLD84_01520
Transcription machinery [BR:
vnt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
OLD84_01520
DNA repair and recombination proteins [BR:
vnt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
OLD84_01520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
DUF961
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
UZD13272
LinkDB
All DBs
Position
247760..248704
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AA seq
314 aa
AA seq
DB search
MIEIEKPKIETVEVSEDATFGKFVVEPLERGYGATLGNSLRRILLSSLPGAAVTSVQIDG
ALHEFSTIDGVVEDVTTIILNLKKLALKIYSDSEKTLEINVQGEGIVTAADITYDSDVEV
LNPELPIATINSKGSLHMKITASTGRGYRNSEQNKHDEQPIGVVAVDSIFTPVSRVTYTV
EDTRIGQVASYDKLTLDVTTDGSIRPEEAVSLAAKVFTEHLNIFVGLTDQAQKAEIMIEK
EEDQKEKVMEMTIEELDLSVRSYNCLKRAGINSVQELANKSEEDMMKVRNLGRKSLEEVK
VKLDDLGLGLRDDD
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaaattgaaaagccaaaaattgaaacggtagaagtcagcgaagatgctacgttt
ggaaaatttgtcgtcgagccgcttgaacgtggatatggtgccacacttgggaactccttg
cgtcgtatcctactatcctcacttccaggtgctgctgtgacatctgttcaaattgacggg
gcacttcatgagttttcgacaattgatggtgttgttgaagatgtaacaacaataattttg
aatctaaaaaaactagctctaaagatttactctgattctgagaaaacattagagattaat
gtgcagggagaaggaatagttacggctgcagacattacgtatgatagtgatgtagaagta
ttgaatccagaactgccaattgctacgattaatagcaaaggtagcttgcatatgaaaata
acggcatctactggacgcggttatcgtaattccgaacaaaataaacatgatgagcagcca
atcggtgttgttgcagttgattctatttttacacctgtatctcgtgtcacgtacacggta
gaagatacacgtataggtcaagttgcaagctacgataagttaacgttagatgtaacgact
gatggaagcattcgtccggaggaagcagtctccttagcggcaaaagtctttacagagcat
cttaatattttcgtaggattaacagatcaagcacaaaaagctgaaatcatgattgaaaaa
gaagaagatcaaaaagaaaaagttatggaaatgacaatagaagaactagatctttctgtc
agatcctataattgtttgaaacgtgctggcattaattcagttcaagagcttgcaaataaa
tctgaagaagatatgatgaaagtccgtaatttaggccgtaaatcactagaggaagtaaaa
gtaaaactagatgatcttggcttaggcttacgcgatgatgactaa
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