Virgibacillus natechei: OLD84_03420
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Entry
OLD84_03420 CDS
T08602
Name
(GenBank) Cna B-type domain-containing protein
Organism
vnt
Virgibacillus natechei
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cna_B
Collagen_bind
SpaA
Big_8
bMG10
DUF11
Gram_pos_anchor
REGB_T4
Motif
Other DBs
NCBI-ProteinID:
UZD13620
LinkDB
All DBs
Position
597957..607022
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AA seq
3021 aa
AA seq
DB search
MNKRLSILFIFMLTFQTISGSLFLPSQAAAEGSDSEQSVFTGISFTDEDGKAVNNDEMDG
ESAVNVHVDWSIEHVEVEEGSTDSFLLPDELHMEEEQQGALTDGEKEVGTYQAAMDGEVS
VSFNDVVEEYTAAEGTFVVNAVAVEQLADQGEEAVEEEGSEANQEEEVVEEEFEEAATEE
DPEKQEAEAIDESDEQSLNSEEIVEEDNALEEDITTFNASAVESLDGNLSENIFTFVSLT
HYGNEIVDGSFVDISDGTQVEIEFAWDTEGLDVQSGDTVSMQLPDTFEQVTTPNTPIVTS
GTTVGTYSIQDGELIFVFDDTIEDGDVSNGEVGLNLDFNLQKFEENIEQVIQFSDSDNTE
INVMARPTNTAEDITKEGHPDQSHNASEITWTVEVINNSDEAVSDATLSDVLPDGLGSPE
NFVVTELSTGLNGDKAIGEVVDDISPSVDGNEFNFAFDDLEPYQGYRIEYATAVTDRDQT
EFTNDATFYNGEENLLADATVSGLTASNPVEKSGSYNNETGQIDWTIVANENGFNIESAI
IDDDLPAGLTVDGDTLTVEKYVDGSHDESIRIDTNDFPIELGGTDANEHYVINFSTDIDY
EEVNESEYQRENSFTNVATLKDGDEELAEDDTTVEFNREPLLEKSGESNVDYENKTLSWT
IDVNKAQHPLNELVITDMIPAGLSITEEDIVITNENEVTVEADIEIIDDDQQEVVINLSD
VGTQHITIEYTTEIEDFEIDSFKNAVGIGGDGIGEGDHDTGAQINPPGNSFGKTYVEDSI
NYNEKTMEWQLTVNPRREAIDELQIVDTFPNKGLILLPGTLSITVDGQDITGSVDLSPNT
EDGETGYQKGFTLDFDDRTLPLNNNVIVTYKTSYDPQEEVEGDFLDPHEGEEQNQIYDNE
ALFTGTTVNENDFEPVRADYVEVREDSWNSGKKEGQLVSVDEEGNIVNDNDWQSGSERKI
AWQLFTNYQQQNLGTGVVITDTLEYEGAIDEGSVTVTVYDVDADGDTSISEDATVLTENE
DYTIEHAGDEFTLTFNDDFTVDERYVVEFTTTVPNISQENYTNEATVSVGDDEYPYTGTV
SYDNYNNFLDKSAIGQEGSEVYIGDKVNWEVKVNDSLSIINNAEIKDIISDGMEYVEGTL
EISTGDGNSLNEGEDYIFSNTKTEDDRTILSIELSESLNQALNQALTLNYTTVVTAEDGD
TVSNEVSLNGEDIEVDSISSQELTAEEFSWVSGEFNENRGALQIVKADSETGDPIENNSA
TFELYYDLNGERVQFGDQFEIEENGEIVIGNLPLRTYYLQEVEAPTGYTIDEEEQVIEVT
EPYGNEEHVYESEFLNTKIKTDISVTKEWDDADNQDDLRPGFIEVQLLANDEEVGDAQTL
SDDSEWAHTWTDLDEYQSNGQIIDYTVEEVNVPNGYESSIDVDEDGYITITNSHAPEMTQ
VSVSKEWDDANDQDGVRPTNVTVNLLADGEIESQTVLNEDKDWEHLFADLPVYENGEEIS
YSVTEDAVTDYSTDIKFTGTEEEPAYTVINSYTPGETSVTVTKAWDDADNQDGNRPETLE
VQLLANGEEHGNPVTLDGSDWSHTWNELDANSNGEPIEYTVQEIEVPEDYEVSVNDDDHG
NIIITNSYEPETTEIAVSKSWDDANDQDGVRPTNVTVNLLADGEIESQTVLNEDKDWEHL
FTDLPVYENGEEISYSVTEDTVTDYSTDVKFTGTEEEPAYTVINSYTPGETSVTVTKGWD
DATNQDGNRPTSIEVQLTADGEAHGEPVTLNQSNWTHTWGELDANANGQPIEYTVQEIEV
AEGYEVSVNDADHGNIMITNSYEPETTERTVRKAWDDADNQDGIRHDNVTVNLLANGEVV
STTVLDDENDWQHTFSNLPVNQNGEEINYRVTENNVANYTASIDADPDNENGFVITNSYT
PEETAVTVTKAWNDGDNQDGNRPDTIEVQLIGNDEEIGDPVEIDASNDWTHQWTGLDLNE
DGEAIEYTVVEQDVPEEYTVTVNNNDHGNIIITNNYTPEVTEIPVTKVWDDDKDRDRVRA
SNVRVILLADGTIVEESILNEARDWEHTFTNLPVYEDGTEVNYSVTELTVPEYSTSVEAD
DDGFVVTNSYTPEETTATVIKNWNDADNQDGIRPESIEVQLTANGEATGYPVEIDAEDGW
TYTWDSLPLNADGEAINYSVEELNVPEGYETAVNDEDHGNLILKNNHTPEEINITGTKNW
DDADNQDGIRPEAITVNLFANDNFVESVNVTESDEWNYSFEDLPKFEAGEEINYTITENK
VEGYEPEIDGFDITNTHTPEVIDVNGTKTWDDADNQDGIRPESITVNLLADGEPIDSTEV
TADDDWSYSFTELPKFEAGEEIVYTVTENTVEDYTQTINGFDIKNEYTPSKTAVTVTKNW
DDAFNQDGIRPETIEVQLTADGEDQGEPVELSEDNNWTHTWTELDEKAASEQIVYSVVEV
TELGEYETTTDDEDHGNIIITNSYTPETTAVTGTKTWDDAENQDGIRSESITVNLHANGE
AIDSEEVTEEDDWSYNFENLPKYEAGEEITYTITEDEVEGYETEINGFDITNTHTPEMID
VNGTKTWDDANNQDGIRSESITVNLHADGDLVDTAEVTAADNWNYMFTDLPKYKDGTEID
YTITEETVEAYETEIDGFNITNSYTPETTEITGIKTWDDADNQDGNRPDSITVNLLANGE
QVDSVEVTAEDDWEYSFIDLPKYEAGEEIVYTVTENPVEGYTQTIDGFDMTNQYTPGQTA
VTVTKNWDDANNQDSIRPEVIEVQLTADGEEQGEAVELSDENNWTHTWTELDEKVAGETI
DYSVVELTEVPEYETTVNDADHGNIIITNAYTPEEIEISGTKTWEDADNKDNTRPESIIV
NILANGEVVHSIEVTEADDWNYSFTNLPKYEAGKEVVYSVSEDTVEGYESRVEGYDITNT
VIPVTPETEELGGTTPDSTDKPSGSAEEVSGTTEPADTARDTGSKLPDTATNMFNLLVLG
IGLLIVGIVILLAYRRKEKAS
NT seq
9066 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaacgattaagcattctgtttatatttatgctgacctttcagacgatttccggt
agtttatttttaccctcacaagctgcagcagagggatcggattcggagcaaagcgttttt
actggaatatcgttcacagatgaagatggaaaagcagtaaataatgacgaaatggatggc
gaatcagcagtgaatgttcatgttgattggtcaattgagcatgtagaagtagaagaggga
agcactgattcatttttacttccagatgaattacatatggaagaggaacaacagggtgca
ttaacagatggtgagaaagaagttggaacttaccaggctgctatggatggagaagtgtcg
gttagttttaatgatgtggttgaggaatacacagcagcagaaggaacctttgttgtaaat
gctgtagcggttgaacaactagcagatcagggtgaagaagctgttgaagaagaggggtca
gaagcaaatcaagaggaagaagtagttgaagaagagtttgaagaagcagcaacagaagaa
gaccccgagaagcaagaagcagaagcgattgacgaatctgacgaacaatcgttgaattct
gaggaaatagttgaagaagacaatgcgctggaggaagacattacaacttttaatgcctca
gcagtagaatcacttgatgggaatctttcagaaaatatattcactttcgtaagtttgact
cattatggtaatgaaattgtggatggatcatttgtcgacattagtgatggaacacaagta
gagattgaatttgcttgggataccgaaggacttgatgttcaaagcggagacactgtttca
atgcagttacctgatacttttgaacaagtcactacaccgaacacacctatagttacaagt
ggtaccacagttggaacgtacagtattcaagatggtgaattgatatttgtatttgacgac
actattgaagatggtgatgtttccaacggagaagttggcttgaatttagactttaactta
caaaagtttgaagaaaacattgaacaagtcattcaatttagtgactcagataatacagag
attaatgttatggctagacccactaatactgcagaagatattacaaaagaaggacatcca
gatcaaagtcacaacgcaagtgaaattacttggactgtcgaggtaattaataacagtgat
gaagcagtatctgatgctacattatcagacgttttacctgatggtctaggttctccagag
aatttcgttgtaacagaattatctactggattaaatggtgacaaagctattggtgaagta
gttgatgatatttcaccaagtgttgatggtaatgaattcaactttgcatttgatgatttg
gagccttatcaaggatatcgtatagaatatgctacggctgttactgatagggatcaaaca
gaattcacaaatgatgctacattttacaatggtgaagagaatttgcttgcagacgcgact
gtgtctggtctgactgcaagtaatccagttgaaaagtctggttcatataataatgaaaca
ggtcaaatagattggacaatcgtagcaaatgagaatggttttaatatcgaaagtgcaatc
attgatgatgatctaccagcaggattgactgtcgatggagacacattaacagttgaaaaa
tatgttgatggttctcatgatgaaagtataagaattgatacaaatgatttcccaattgaa
cttggaggaacagatgcaaatgaacattatgtaatcaactttagtacagatattgattat
gaagaggttaacgaaagtgaatatcaacgtgaaaacagctttactaacgttgccacttta
aaagatggtgatgaagaactggctgaagatgatacaactgttgaatttaatagagaaccg
cttttagaaaaatcaggtgaatctaatgttgactatgaaaataaaacgttaagttggaca
attgatgtaaacaaagcgcaacatccgcttaatgaacttgtaattacagacatgattcca
gcaggcttaagcatcacggaagaagatatcgtaattactaacgaaaatgaagttactgta
gaagcagatattgaaatcatagatgatgatcaacaagaagttgttatcaatcttagtgat
gttggtacacaacatataacgatagagtacacaacagagattgaagattttgagattgat
agtttcaaaaatgctgttggcataggcggggacggtatcggtgaaggtgaccatgatact
ggtgcacaaattaatccaccaggaaactcttttggaaagacttatgtagaagatagcata
aactacaatgaaaagaccatggaatggcaacttacagttaatcctcgacgtgaagctata
gatgagctgcaaatagtagacacatttcctaataagggattgattctattaccaggtaca
ttgagtattacagtagacggtcaggatattacaggtagcgttgatctttctccaaataca
gaggatggggaaacgggctatcaaaaaggatttacgcttgattttgatgaccgcacttta
ccattaaataataatgtaattgtcacgtataaaacgtcctatgatccacaagaggaagtc
gaaggtgattttctagatccacatgaaggtgaagagcaaaatcaaatatatgataacgag
gctctattcactggaaccactgttaatgaaaatgacttcgaaccagttagagctgattat
gtagaggtgagagaagactcctggaacagtggtaaaaaggaaggtcagctcgtaagcgtc
gatgaagaaggaaatatagtaaatgataatgattggcagagcggttcggaaagaaaaatt
gcttggcaactatttactaactaccaacaacaaaatcttggaacaggtgttgtgattaca
gataccttggagtatgaaggtgcgattgatgaaggtagtgtcacagtgactgtttatgat
gttgatgccgatggtgacacatcaatttctgaggacgctactgtactaactgagaacgaa
gactatacaattgagcacgctggtgacgagtttactttaacattcaatgatgattttact
gtcgacgaaagatatgttgttgaatttacaacaacagtaccaaacatttcccaagaaaat
tatacgaacgaagcgacagtttcagttggtgatgacgagtatccgtatactggtacagtc
agctacgataactataataacttcttagataaatcagcgattgggcaagaaggttctgaa
gtttatattggtgataaagttaattgggaagttaaagtaaatgatagcttatccattatc
aataatgcagaaattaaagatatcattagtgatggaatggaatatgtggaaggcacactt
gagatttcaacaggagacggtaattcactaaatgaaggcgaagactacatcttttcgaat
accaaaactgaagatgatagaacaatcctttcaattgaacttagtgaatcactaaaccaa
gcactaaaccaagcactgactctaaactatacaacagtagtcacagcagaggatggagat
acagtcagcaacgaagttagtttaaatggagaagatattgaagtagattctattagttct
caagaactgactgcagaagaatttagttgggtatctggtgaatttaacgaaaaccgcggg
gcattgcaaattgtcaaagccgactctgaaacaggagacccaattgaaaataattcagct
acgttcgagttgtattatgatttaaacggagagcgtgtgcaatttggcgaccagtttgaa
atagaagaaaatggtgaaatcgtgattggtaacttaccacttagaacatattacttacaa
gaagtagaagcacctactggctataccattgatgaagaagagcaagtaatcgaggttact
gagccatacggtaatgaagaacatgtttatgaatcggaatttttaaacactaagataaaa
acagatatctcagttactaaagaatgggatgatgctgacaaccaggacgatttacgtccg
ggatttattgaagttcagttgctcgcgaacgatgaggaagttggagatgcgcagacactt
tcagatgacagcgagtgggcacatacttggacagatttagatgagtatcagtctaatgga
caaataattgactatacagttgaagaagttaatgtacctaatggttatgagtcatcaatt
gatgttgatgaggatggctatataactatcactaactctcatgcaccggaaatgactcaa
gtttcagtctccaaagaatgggatgatgcaaatgatcaagacggtgtccgtccaactaat
gtaacggtaaatctattagctgacggtgagattgaaagtcaaactgttttaaatgaagat
aaagattgggaacacctattcgccgatcttccagtatatgaaaatggagaagaaatcagc
tatagcgtcacggaagatgcagtgactgattattcaacagatattaaatttactggaaca
gaggaagaaccagcttatacggtaataaactcctatacaccaggagaaacaagtgtgacc
gtaacaaaagcatgggatgatgcagacaaccaagacggtaatcgcccagaaacactcgaa
gttcaacttttagcaaacggtgaggaacacggtaatcctgtaactctagatggatctgat
tggtcccacacatggaatgaactagatgctaattcaaatggtgaaccaatcgagtatacg
gttcaagaaattgaagttccagaagactatgaagtaagcgtgaatgacgatgaccacgga
aacatcatcattacaaacagttacgaaccagaaacaacggaaatagctgtaagtaaatca
tgggatgatgcaaatgatcaagacggtgtccgtccaactaacgtaacggtaaatctatta
gctgacggtgagattgaaagtcagactgtattaaatgaagataaagattgggaacaccta
ttcaccgatcttccagtatatgaaaatggtgaagaaatcagctatagcgtcacggaagat
acagtgactgattattcaacagatgttaaatttactggaacagaggaagaaccagcttat
acggtaataaactcctatacacctggtgaaacaagtgtaaccgtaacaaaaggttgggat
gatgccactaaccaagatggtaatcgtccaacaagcattgaagttcaattaacagcagat
ggagaagcccatggtgagcctgtaacgctaaatcaatcgaattggacacatacgtgggga
gaattagatgccaatgcaaatggtcaaccaatcgagtatacggttcaagaaattgaagtt
gcagaaggctatgaagtctctgtaaatgacgcggaccatggaaatattatgattacaaac
agttatgaacccgaaacaacggaaagaacggttcgtaaagcatgggatgacgcggataat
caagatgggatccgtcatgataatgtaacagtcaatctattagctaatggagaggttgtc
agcacaaccgttttagatgatgaaaatgactggcagcacacattctctaatcttccagta
aatcaaaatggggaagaaattaattatagagtgacagaaaataacgtagccaattatacg
gcttccattgatgccgatccagacaatgagaatggatttgttatcacaaatagctataca
ccagaagaaactgcagtaaccgtaacaaaagcatggaatgatggagacaatcaagatggt
aatcgaccagatacaatcgaagtacagcttattggaaatgatgaagaaattggagatcca
gtagaaatagatgcatccaatgattggacgcaccaatggactggattagatttaaatgaa
gacggggaagcaattgaatacacggttgtagaacaagatgtacctgaagaatatacagta
acagtgaataataatgatcacggtaacatcattattacaaataattatacgcctgaagta
acagaaattcctgttaccaaagtatgggatgatgataaagacagagatcgcgttcgtgca
tcaaatgtgagagtaattcttcttgcagatggtacaattgttgaagaatcaatattaaac
gaagctcgtgattgggagcatacattcaccaatcttcctgtgtatgaagatgggacggag
gttaactacagtgttacggagttaaccgttccagaatattctacttcggttgaagcggat
gatgatggatttgtagtgacaaactcttacacaccagaagaaacaacagcaaccgtaata
aaaaattggaacgatgccgataaccaagatggtatccgaccagaaagtatcgaagttcaa
ttaacagcaaatggcgaagcaacaggatatccagtagaaatagatgcagaagatggatgg
acgtatacttgggatagtcttccattaaatgcagatggtgaagcaattaactactctgtt
gaagaacttaatgtaccagaaggatatgaaactgcagtaaacgatgaagatcatggcaat
ctcatcctaaagaataatcatacacctgaggaaattaatattactggtacgaaaaattgg
gatgacgccgataaccaagatggcattcgtccggaagcaattacagtaaacttatttgca
aacgacaactttgtcgagtcagtaaatgtaacagaatcagatgagtggaactatagcttt
gaagacctgccgaaattcgaagcaggcgaggaaataaattacacgattacagagaataag
gtggaaggatacgaacctgaaatagacggattcgatattaccaacacccatacacctgaa
gtaatcgatgtaaatggtacgaaaacatgggatgacgccgataaccaagacggcattcgc
ccagaatcaatcaccgtaaacctgttagcggatggcgagccaattgactctactgaagta
acagcagatgatgattggtcatacagcttcacagagttaccgaagtttgaagcaggtgaa
gaaatcgtctacacagttacagaaaacacagtagaagattacacacaaaccatcaatgga
ttcgacatcaagaacgaatacacaccaagcaaaacagcagtaacggtaacgaagaactgg
gatgatgcgtttaaccaagatggcatccgaccagaaacgattgaagttcaactaacagct
gacggggaagaccagggtgaaccagtagagctatctgaagataacaactggacacacact
tggacggaactagatgaaaaagcagctagtgaacaaattgtttactctgttgtagaagtt
acagagttaggggaatatgaaacgactaccgatgacgaagatcacggaaatattatcatt
acaaacagttacacaccagaaacaacagcagtaactggtacaaaaacatgggatgatgct
gagaaccaagacggcatccgctcagaatcaatcacggtgaacctccatgcaaatggtgaa
gcaattgattcagaagaagtaacagaagaagatgattggagctacaacttcgaaaacttg
ccgaaatacgaagcaggtgaagaaataacttacacaattacagaggatgaggtagaaggt
tatgaaaccgaaataaacggatttgatatcacgaacacccatacacctgaaatgattgat
gtaaatggtacgaaaacatgggatgatgcgaacaaccaagacggtatccgttcagaatcg
attacagtcaatctacatgctgatggtgacttagttgatactgctgaagtaacagcagca
gacaattggaactatatgttcacagatctaccgaaatataaagatggaacagaaatagat
tacacaatcacagaagaaactgtagaagcttatgaaaccgaaatcgacggatttaatatt
acaaacagctacacaccagaaacaacagaaataactggaataaaaacatgggatgacgct
gacaatcaagatggtaatcgtccagactcaattacagtgaacctgttagcaaatggtgag
caagttgattcagttgaagtaaccgcagaagatgattgggaatatagtttcatagattta
ccaaaatacgaagcgggtgaagagattgtttacacggttacagagaaccctgtagaagga
tatacacaaacaatcgatggattcgacatgacgaaccaatacacaccaggacaaacagca
gtaacggtaacaaaaaactgggatgatgcaaacaatcaagatagcatccgcccggaagta
atcgaagttcaattaacagcagacggtgaagaacaaggtgaggcagtagagctttctgat
gaaaataactggacacacacttggacggaactggatgaaaaagtagcaggagaaacaatt
gattattcagtagttgaattaacagaagtacccgagtatgaaacaacagtgaatgatgct
gatcatggaaacatcatcatcaccaatgcctacacaccggaagaaatagaaatctctggt
acaaagacatgggaagatgctgataacaaggacaacactcgtccagaatccattatagtt
aatattttggcaaatggagaagtcgttcattcaattgaagtaaccgaagctgatgattgg
aattatagcttcacaaacttgccgaaatacgaagctggaaaagaggtcgtttactctgtt
tcagaggatactgtagaaggttacgaatcgagagtggaaggttatgacatcacaaacact
gtaatacctgttactccagaaacggaagagctaggaggaactacacctgattctacagac
aaaccaagtggttcagcagaagaagtatcaggtacaacagaaccagcagatacagctaga
gatactggcagtaaattaccagatacagcaacaaatatgtttaatttacttgtgcttgga
attgggttgttaatcgttgggattgttatattactagcttatagaaggaaagaaaaagct
tcataa
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integrated database retrieval system
