Virgibacillus natechei: OLD84_08315
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Entry
OLD84_08315 CDS
T08602
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
vnt
Virgibacillus natechei
Pathway
vnt00010
Glycolysis / Gluconeogenesis
vnt00020
Citrate cycle (TCA cycle)
vnt00260
Glycine, serine and threonine metabolism
vnt00280
Valine, leucine and isoleucine degradation
vnt00310
Lysine degradation
vnt00380
Tryptophan metabolism
vnt00620
Pyruvate metabolism
vnt00630
Glyoxylate and dicarboxylate metabolism
vnt00640
Propanoate metabolism
vnt00670
One carbon pool by folate
vnt00785
Lipoic acid metabolism
vnt01100
Metabolic pathways
vnt01110
Biosynthesis of secondary metabolites
vnt01120
Microbial metabolism in diverse environments
vnt01200
Carbon metabolism
vnt01210
2-Oxocarboxylic acid metabolism
vnt01240
Biosynthesis of cofactors
Module
vnt_M00009
Citrate cycle (TCA cycle, Krebs cycle)
vnt_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
vnt_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
vnt_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
vnt00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
OLD84_08315 (lpdA)
00020 Citrate cycle (TCA cycle)
OLD84_08315 (lpdA)
00620 Pyruvate metabolism
OLD84_08315 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
OLD84_08315 (lpdA)
00640 Propanoate metabolism
OLD84_08315 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
OLD84_08315 (lpdA)
00280 Valine, leucine and isoleucine degradation
OLD84_08315 (lpdA)
00310 Lysine degradation
OLD84_08315 (lpdA)
00380 Tryptophan metabolism
OLD84_08315 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
OLD84_08315 (lpdA)
00670 One carbon pool by folate
OLD84_08315 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vnt04147
]
OLD84_08315 (lpdA)
Enzymes [BR:
vnt01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
OLD84_08315 (lpdA)
Exosome [BR:
vnt04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
OLD84_08315 (lpdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
GIDA
HI0933_like
FAD_binding_2
FAD_oxidored
FAD_binding_3
NAD_binding_8
AlaDh_PNT_C
DAO
Amino_oxidase
3HCDH_N
Lys_Orn_oxgnase
UDPG_MGDP_dh_N
NAD_binding_7
Thi4
Motif
Other DBs
NCBI-ProteinID:
UZD14484
LinkDB
All DBs
Position
1586822..1588228
Genome browser
AA seq
468 aa
AA seq
DB search
MVVGDFPIELDTLVVGAGPGGYVAAIRAAQLGQKVTIVDKGALGGVCLNVGCIPSKALIQ
AGHLAEQAHGNEELGISTENVSVDFSKVQEWKGKVVNKLTSGVESLLKGNKVDILNGEVY
FVDKNTAKVMDEKDSQTYKFNNCIIATGSSPIEIPSFKFSDRVLDSTGALNLKEIPKKMV
VIGGGYVGTELGSAYANFGTEVTILEGTNEILGGFEKQMKQVVQKRLKKKGAKVITNAMA
KGVEETKDGVTVSYEVDGKEETVDADYVLVTVGRKPNTEEIGLEQVGIETDDKGLIKIDK
QSRTNIDNIYAIGDIVEGLPLAHKASYEGKIAAEVISGEKSEIDYIGMPSVAFTDPELAS
VGYTEKEAKEAGYDAKASKFPFAANGRALSLNDSDGFMKLITRKEDGLVIGAQIAGPNAS
DMIAEIGLAIEAGMTAEDIALTVHAHPTLGEITMEAAEVALGTPIHSM
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atggtagtaggagactttccaattgagttagacacgttggtagttggtgcaggcccaggc
ggttatgtagcagcaattcgtgcagcacaattaggtcagaaggttacaattgttgataaa
ggtgcacttgggggagtttgtttaaatgttgggtgcattccatctaaagcattaatacag
gcaggccatttagcagaacaggctcacggtaacgaagaattaggtatttcaacagagaat
gtttctgtagacttttctaaagttcaagaatggaaaggaaaagtagttaataaacttact
tctggtgttgaaagtcttttaaaagggaataaagtagacattttaaatggtgaagtatac
tttgttgataaaaacactgcaaaagttatggatgagaaagactctcaaacatacaaattt
aataattgtattatcgcaacaggctcatcaccaattgaaattccaagtttcaaattctct
gatcgtgtactggattctactggtgcactcaatctaaaagaaattccaaagaaaatggtt
gtaatcggtggtggatatgttggaactgaactaggttctgcttatgcaaactttggtaca
gaagttacgattttagaaggtacgaatgaaatacttggcggttttgaaaaacaaatgaaa
caagttgttcaaaagcgcttgaagaaaaaaggcgcgaaagtcattacaaacgcaatggct
aaaggcgttgaagaaacaaaagatggcgtaactgttagctatgaggtagacggtaaagaa
gaaacggtagatgctgattacgttcttgttacagtcggcagaaaaccaaatacagaagaa
attggcttagagcaagtaggtattgagacggacgataaaggtttaattaaaattgataag
caatctcgcacaaacattgataatatttatgctattggcgatattgtagaaggactgcca
ctggcgcataaagcatcatatgaaggaaaaattgcagcagaagtaatcagtggtgaaaaa
tccgaaattgattacatcggcatgccttcagttgccttcacagatcctgaattagcatca
gttggttacactgaaaaagaagctaaagaagctggatatgatgcgaaagcgtctaaattc
ccattcgcagccaatggacgtgcattatcactaaatgatagcgacggtttcatgaagcta
atcacacgtaaagaggatggactagttattggtgctcaaatagctggaccaaatgcaagt
gatatgatagcagaaattgggcttgcaattgaggctggaatgactgctgaagatattgct
ttaacagttcatgcccatcctaccttaggagaaattacaatggaagcagcagaagtagct
ttaggaactccaattcacagtatgtaa
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