Virgibacillus natechei: OLD84_08580
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Entry
OLD84_08580 CDS
T08602
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
vnt
Virgibacillus natechei
Pathway
vnt00470
D-Amino acid metabolism
vnt00550
Peptidoglycan biosynthesis
vnt01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vnt00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
OLD84_08580 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
OLD84_08580 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vnt01011
]
OLD84_08580 (murD)
Enzymes [BR:
vnt01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
OLD84_08580 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
vnt01011
]
Precursor biosynthesis
Amino acid ligase
OLD84_08580 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
Peripla_BP_4
Mur_ligase
CbiA
PTS_IIB
LD_cluster2
Catalase_C
Motif
Other DBs
NCBI-ProteinID:
UZD14534
LinkDB
All DBs
Position
1639605..1640954
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AA seq
449 aa
AA seq
DB search
MKKLTDFKYSHVLVLGLAKSGTAAAKLLLANEIEVRVNDINAEEDEESVIALRGMGAEVI
VGSHPIHVLDDIEVIVKNPGIPYENPVVKEAQQRGIPIITEIELAGQLVDESIIGITGSN
GKTTTTTLIEAMLAKSNQPVKVAGNIGNVATDVAQTLTKGEKLVLELSSFQLLGIEKFKP
GIAVLLNIYEAHLDYHKTFENYKNAKHTIFKNQMNEDYLVYNRDDSTLVDAVKKAKSQKI
PFSVMQREENGAWVDETSIYFKDEKIIDRESIVLVGKHNLENIVASIAAAKLSGASNEGI
REVLTTFAGVKHRLQFVDTIKNRVFYNDSKATNMLATQKALTSFAQPVILLAGGLDRGND
FTDLIPYLKNVKGMVVFGETAEKLKSLAEDAGVATTVMAKDVQQAVETAYSISQENDVIL
LSPACASWDQYRTFEERGNMFIQAVHTLV
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaaaattaacagattttaaatattctcatgttcttgtattgggattggcgaaaagt
ggtacagccgcagctaaattattattggctaatgaaatagaagtacgtgtgaacgacata
aatgcagaggaagacgaggagtctgtcatcgctttaagaggaatgggagcggaagtaatt
gtcggttcccatccaattcacgttttagatgatattgaagttattgtaaaaaacccaggt
attccatatgaaaatccagttgtgaaagaagcacaacagagagggataccgattattacg
gaaattgaactcgctggtcagttagtagatgagtccattattggaataaccggttctaat
ggaaagacgacaacgacaacattaatagaagcgatgttagctaagagcaatcaacccgtt
aaggttgctggtaatatcggtaatgtagccacggatgttgcgcaaaccttaacgaaaggt
gaaaagctggtactggaactttcttcctttcaattgttaggaatagagaagttcaaacca
ggcattgctgtcttattgaatatatatgaagcacatttggactatcataaaacatttgaa
aactataagaatgccaaacatactatttttaaaaatcagatgaatgaagattacctcgtc
tataatagggatgattcaactttggttgatgccgtgaagaaagcaaagtctcaaaaaatt
ccattttcagtaatgcagcgagaggaaaatggagcatgggttgatgagactagtatatac
tttaaggatgaaaaaataatagatcgtgaatctattgtactagtaggtaagcataattta
gaaaatattgtagcttccattgctgccgctaaacttagcggtgcttcgaatgaagggata
agggaagtattaacaacgtttgcaggggtgaagcatcgcctgcaatttgttgatacgatt
aaaaatagagtattttataatgattccaaagcgactaatatgctggcaacgcaaaaggca
cttacatcttttgcacaacccgttatattattggctggtggcctagatcgtggaaatgac
tttaccgatttaattccatatcttaagaatgtcaaaggaatggtagttttcggagaaaca
gcagagaaattaaaaagccttgcagaagatgctggggttgctacgacagtgatggctaaa
gatgtacaacaagcagtagagacagcgtattctatttctcaggaaaatgacgtgatatta
ctatcacctgcttgtgcaagttgggatcagtacaggacttttgaagaaagaggtaatatg
tttatacaagctgtgcatacattagtgtag
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