Virgibacillus natechei: OLD84_08780
Help
Entry
OLD84_08780 CDS
T08602
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
vnt
Virgibacillus natechei
Pathway
vnt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vnt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
OLD84_08780 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vnt03400
]
OLD84_08780 (priA)
Enzymes [BR:
vnt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
OLD84_08780 (priA)
DNA repair and recombination proteins [BR:
vnt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
OLD84_08780 (priA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
ResIII
PriA_C
Helicase_C
Zn_ribbon_PriA
WHD_PriA_bact
AAA_30
AAA_19
Cas3-like_C_2
nSTAND_NTPase5
Zn_ribbon_6
Zot
PIF1
SWI2_SNF2
SLFN-g3_helicase
ATPase_2
DUF8304
Viral_helicase1
AAA_16
Phage_PBS1_41
Motif
Other DBs
NCBI-ProteinID:
UZD14571
LinkDB
All DBs
Position
1682980..1685388
Genome browser
AA seq
802 aa
AA seq
DB search
MNIAKVIVDVPVSSINQTFDYQIPERFQDILTNGMRVIVPFGPRKLMGFVVGKATESSFD
NLKEISDVLDLTPALTNELLDLGKWVANQTMSLYITALQAMLPQVLKAQYKKEIKRITDE
ALPDPLENLFAGRDVIAFEELEASTIRYPQLQKAVQDGEISIEYLVKSKITKKYVTMIAP
ARESYLLEEAKQDLSTSAKKQRQILIYFIESPEAIEKQLLLKKLNTTSSTLKALLDKSLL
GSYRTEVYRNPYDDDTITRTTALELTEEQQLAVQPIQEKIASGEHDVFLLHGVTGSGKTE
VYLQAIQEVIYKGKEAIVLVPEISLTPQMVKRFKERFGTNVAVMHSALSAGEKYDEWRRI
QRKEVQVVVGARSAIYAPFENIGIIIIDEEHETTYKQEDQPRYHARDVAIYRAETHQCPV
ILGSATPTLESFARAQKGVYKLGTLSKRTNEKDMPEVNIVDMREELHAGNRSMFSRSLKE
KIEERIQKGEQIVLLLNRRGHSTFVMCRDCGHVKECPHCDIALTFHKNNNQLKCHYCSHE
EVMPRNCPECESDLIRYFGTGTQKVEESLTKLIPEASVIRMDVDTTRRKGSHEKLLNQFV
NKEANILLGTQMIAKGLDFENVTLVGVLTADSMLHLPDFRSSEKTFQLLTQVSGRAGRHE
LTGEVIVQTYTPDHYSIELASNYDFTQFYKKEMGMRKTFQYPPYVFLVLLTVTHQNKVKV
AQVTQRIVQLLLKSVKDETTVLGPTPSSIPRMKDRYRYQCMIKYRNEPQLRDYINKILDQ
YAEEMRKEDLVIKVDMQPYHLM
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
gtgaatatagcaaaagttattgtagatgtaccggtcagctctattaaccaaacattcgac
taccagattccggaaaggtttcaggatatacttaccaacgggatgcgtgtaattgtccca
tttggtcctagaaaattgatgggttttgttgttgggaaagcaaccgaatcttcttttgat
aatttaaaggaaattagtgacgtacttgatctaacgcctgcattaacgaatgaactattg
gaccttggaaaatgggtagcaaatcaaaccatgagtttgtatataacagcattacaggcc
atgttgccacaagtgttaaaagctcaatataaaaaagaaattaaacgcatcacggacgaa
gcgctgccagatcctttggagaacctttttgcaggaagagatgtaattgcttttgaggaa
ttggaagcatcaaccattcgttatcctcaacttcaaaaggcggtgcaagatggagaaata
tcaatagaataccttgtgaaatctaaaatcacgaaaaagtatgtaacaatgattgcccct
gctcgagaatcctacttattagaagaggctaaacaagatctatctacaagcgcgaagaaa
caacggcaaatattaatatattttattgaaagtccagaagcgatcgaaaagcaacttctg
cttaaaaagttgaacacgacgagtagtacgttaaaggcattacttgataaatcccttctt
ggatcctatcgaacggaagtataccgcaacccatacgatgatgatacgataacaagaacg
acagcactcgagttgacagaagaacaacaactagcagttcaaccaattcaagaaaaaata
gcaagcggggagcatgatgtctttcttttgcatggtgttactggaagtgggaagacggaa
gtatatctacaagctattcaggaagttatttataaagggaaggaagctattgtattagtt
cctgaaatttcactaaccccacaaatggttaaacgctttaaagaaaggttcggaaccaat
gttgctgtgatgcatagtgcgctttcagcaggtgaaaaatacgatgaatggcgccgcatc
caacgaaaagaagttcaggttgttgttggggccaggtcagccatttatgccccatttgaa
aatatcggtattattatcatagatgaagagcatgaaactacttataagcaagaagatcaa
ccgcgctatcatgcacgtgacgtggccatttatcgtgcagaaacgcatcagtgtccggtt
atattaggaagtgcaacgccaacattggaatcatttgcccgagcacaaaaaggggtttat
aaattaggaaccttaagtaaacgaacaaatgaaaaggacatgcctgaagttaatattgtg
gatatgagagaagaacttcatgccggcaatcgatccatgttttcccgtagtttaaaggag
aaaattgaagaacgtattcaaaaaggagaacaaatcgttttactcttgaacaggcgaggt
cattcaacatttgttatgtgccgggattgtggacatgtcaaagagtgtccgcattgtgat
atcgcgcttacctttcataaaaacaacaatcaactgaaatgtcattattgttctcatgaa
gaggtaatgcctcggaattgcccagaatgtgaaagtgatttaattcgatactttggtact
ggcacacaaaaagtcgaagagtctttaacgaaactcattcctgaagcaagcgttattcgt
atggatgtagatacaacacgcagaaaaggatcacatgaaaagttactcaatcaatttgta
aataaagaagcaaatatattactgggcacacagatgattgcgaaagggctagattttgag
aatgttacgttagtaggtgtattgacagcagactccatgttacatttaccggattttcgc
tcttctgaaaaaacgttccaactattgacacaagtcagtgggcgtgccgggagacatgaa
ctaacgggagaagtaattgttcaaacctatacgccagatcattatagcattgaactagca
agcaactatgactttactcaattctataaaaaagaaatgggtatgagaaaaacgtttcaa
tatccaccatatgtttttttggtattgctcacggtcacacatcaaaataaggtaaaagta
gcacaggtaacacaaagaatcgttcagctgcttctaaaaagtgtaaaagatgaaacgaca
gtgttaggacctacaccatcttctattccgcgaatgaaagatagatatcgttatcaatgc
atgataaaatacagaaatgaaccacaattacgtgactatatcaataaaatactcgatcaa
tacgctgaagaaatgcgaaaagaggatttagtgattaaggtagacatgcaaccataccat
ttaatgtaa
DBGET
integrated database retrieval system
