KEGG   Virgibacillus natechei: OLD84_10590
Entry
OLD84_10590       CDS       T08602                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
vnt  Virgibacillus natechei
Pathway
vnt00010  Glycolysis / Gluconeogenesis
vnt00020  Citrate cycle (TCA cycle)
vnt00260  Glycine, serine and threonine metabolism
vnt00280  Valine, leucine and isoleucine degradation
vnt00310  Lysine degradation
vnt00380  Tryptophan metabolism
vnt00620  Pyruvate metabolism
vnt00630  Glyoxylate and dicarboxylate metabolism
vnt00640  Propanoate metabolism
vnt00670  One carbon pool by folate
vnt00785  Lipoic acid metabolism
vnt01100  Metabolic pathways
vnt01110  Biosynthesis of secondary metabolites
vnt01120  Microbial metabolism in diverse environments
vnt01200  Carbon metabolism
vnt01210  2-Oxocarboxylic acid metabolism
vnt01240  Biosynthesis of cofactors
Module
vnt_M00009  Citrate cycle (TCA cycle, Krebs cycle)
vnt_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
vnt_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
vnt_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:vnt00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    OLD84_10590 (lpdA)
   00020 Citrate cycle (TCA cycle)
    OLD84_10590 (lpdA)
   00620 Pyruvate metabolism
    OLD84_10590 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    OLD84_10590 (lpdA)
   00640 Propanoate metabolism
    OLD84_10590 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    OLD84_10590 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    OLD84_10590 (lpdA)
   00310 Lysine degradation
    OLD84_10590 (lpdA)
   00380 Tryptophan metabolism
    OLD84_10590 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    OLD84_10590 (lpdA)
   00670 One carbon pool by folate
    OLD84_10590 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:vnt04147]
    OLD84_10590 (lpdA)
Enzymes [BR:vnt01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     OLD84_10590 (lpdA)
Exosome [BR:vnt04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   OLD84_10590 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox GIDA FAD_oxidored 3HCDH_N AlaDh_PNT_C NAD_binding_8 DAO FAD_binding_3 FAD_binding_2 Pyr_redox_3 Lys_Orn_oxgnase HI0933_like Trp_halogenase 2-Hacid_dh_C CLU NAD_binding_7
Other DBs
NCBI-ProteinID: UZD11418
LinkDB
Position
complement(2026270..2027691)
AA seq 473 aa
MAKDYDLVVLGGGTGGYVAAIRASQLGMQVAIVEDRDLGGTCLHRGCIPSKALLRSAEVY
KQTKEASDFGVETTDATLNFTKVQERKNNIVETLHKGVQGLMKKGKIDVFEGFGRILGPS
IFSPMPGTISIEYANGDENTMIVPKNVLIATGSKPKSLPGLVIDETYVMSSDEALNMEQL
PESIMIVGGGVIGIEWASMLADFGVEVTVIEYLDTILPTEDEAIAKEAEKLLKKKGITFV
KGAKVLADTLVKEDGVSIDAELEGKQETFTADKILVSVGREANTTNIGIENTDIIVDNGF
IQTNQNFQTKESHIYAIGDVIGGKQLAHVASHEGKVAVEHMNNQNPLSIDYDNVPSCIYS
NPEVASVGLTEKQANDKGFETKIGRFPFKAIGKALVQGDSDGFVKIIADKSTEDILGIHM
IGPHVTDMISEAGLAKVLDATPWEISHSIHPHPTLSEVMAEAALAVEGIQIHG
NT seq 1422 nt   +upstreamnt  +downstreamnt
atggcgaaagattatgatttagtcgtgcttggtggaggaactggtggatatgttgcagct
atacgagcttcccaacttggcatgcaagtagcaatagtagaagatcgtgacctcggtgga
acttgcttgcatcgaggatgtattccatctaaggcattattacgtagtgcagaagtttat
aaacagacaaaggaagcaagtgattttggtgtagaaacaacggatgccacgttaaacttt
acgaaagtccaagaaagaaaaaataacatagtagaaacgctccataaaggtgttcaagga
ttgatgaaaaaaggaaaaattgatgtcttcgaaggatttggtcggattttagggcccagt
atattttcacctatgccaggtactatatcaatcgaatatgcaaacggcgacgaaaataca
atgattgttcctaaaaatgtattaattgcaactggctcaaaacctaaatcacttcccgga
ctagttatcgacgaaacgtatgttatgagttcagatgaagcattaaacatggagcaatta
cctgaatctataatgattgtcggtggtggagtgattggaatagaatgggcatccatgtta
gcagacttcggtgtagaagttactgtaatcgaatatttggatacgatactcccaacagaa
gatgaagcaattgctaaagaagccgaaaaacttttgaaaaagaaaggaattacgtttgta
aaaggagccaaagttttagcagatacattagttaaagaagatggtgtatcgattgatgct
gagttagaaggaaagcaagaaactttcacagcagataaaatactggtatcggttgggcga
gaagcgaatacgacaaatattggtatagagaataccgatattatcgtggacaatggattt
attcaaacaaaccagaatttccagacaaaagaatctcacatctatgcaataggtgatgtg
attggcggaaagcagttagcgcatgttgcttcacatgaggggaaagttgctgttgaacat
atgaataatcaaaatccattatctattgactatgataatgttccatcatgtatttattca
aatccggaggttgctagtgtaggcttgactgaaaagcaggcaaatgacaaagggtttgaa
accaagatagggagatttccatttaaagcaattggcaaagcgttagtacaaggagattca
gatggctttgtaaaaataatagctgataaatccacagaagatatattaggtatccatatg
atcgggccacacgtcacggatatgatctctgaagctgggttagcaaaagtgcttgatgca
acaccttgggaaatatcgcatagcattcatccgcacccaacactttctgaggtcatggca
gaagctgcgttggctgttgagggaatacaaattcatgggtaa

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