Virgibacillus natechei: OLD84_11930
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Entry
OLD84_11930 CDS
T08602
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
vnt
Virgibacillus natechei
Pathway
vnt03030
DNA replication
vnt03410
Base excision repair
vnt03420
Nucleotide excision repair
vnt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vnt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OLD84_11930 (polA)
03410 Base excision repair
OLD84_11930 (polA)
03420 Nucleotide excision repair
OLD84_11930 (polA)
03440 Homologous recombination
OLD84_11930 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vnt03032
]
OLD84_11930 (polA)
03400 DNA repair and recombination proteins [BR:
vnt03400
]
OLD84_11930 (polA)
Enzymes [BR:
vnt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
OLD84_11930 (polA)
DNA replication proteins [BR:
vnt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
OLD84_11930 (polA)
DNA repair and recombination proteins [BR:
vnt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
OLD84_11930 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
OLD84_11930 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_5
XPG_I
Phage_cap_E
HHH_2
IMS_HHH
HHH
Motif
Other DBs
NCBI-ProteinID:
UZD11662
LinkDB
All DBs
Position
complement(2280548..2283187)
Genome browser
AA seq
879 aa
AA seq
DB search
MSNKLVLIDGNSVIYRAFFALPLLSNDKGVYTNAVYGFTTMLLKILEEEEPTHILVAFDA
GKTTFRHETYKEYKGGRQKTPPELSEQFPLLKELLDAFQIPHYQLEQYEADDIIGTLSTQ
SKKNDLNVNVISGDKDMLQLVSDKVTVSLTKKGISDVERYTPEYMKEKMEISPEQIIDLK
ALMGDSSDNIPGVPGIGEKTATKLLKQYGTVESVYNHVDDVRGKKLKENLVTYKADAFMS
KDLVTINCDSPITISIDDLAYEGYEKAKLSTVFKELEFQSLLSRIDLDSVSEGSDERSLK
EIDLTIVHEVTTDMFTGNEALVVEMIAENYHTRSINGIGLVNESDAYFIPVDVALDSDAF
KDWAEDSSKTKSVFDAKKTLVALLNHGIHIKGITFDMLLTSYLLNPSDNNHDIPAIGNRM
GKTDVLYDEEVYGKGAKLKVPEQTMLAEHVARKASILYYLKEEMEDKLKANEQYELCQEL
EMPLALILGEMEHTGVRVDRDRLHDMDKDLNQRLKDLEKEVYDLAGETFNLNSPKQLGPI
LFEKLGLPVIKKTKTGYSTAADVLEQLEDKHEIIPKLLLYRQLGKLHSTYITGLLKVVND
DTSKIHTRFNQALTQTGRLSSIEPNLQNIPIRLQEGRKIRQAFVPEEKEWVMFAADYSQI
ELRVLAHIANDDKLISAFKNNVDIHTQTAMDVFHVGKDEITANMRRQAKAVNFGIVYGIS
DYGLSQSLGITRKEAKQFIERYFESYPGVKTYMEDIVQEAKHQGYVTTLMNRRRYLPEIT
SRNFNTRSFSERTAMNTPIQGSAADIIKKAMIDLHGKLKEEKLQARMLLQVHDELIIEAP
KEEIEKLKEIVPAAMEQTVELIVPLEVDYAYGSSWFDAK
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaacaaactcgttcttattgacggaaatagtgttatttatcgtgctttttttgca
ctacccttattaagtaatgataaaggggtgtatacgaatgcggtttatggtttcacaacc
atgctacttaaaattttggaagaagaagaaccaacacatatccttgttgcatttgatgct
gggaaaacgacatttcgtcatgaaacctataaagaatataaaggtggccgccagaaaacg
cctcctgaattgtcagaacaatttccgttactgaaggaattactagatgcatttcagatc
ccacattatcagttagagcagtatgaggcagatgacattataggcaccctctccactcaa
agcaagaagaatgatttgaatgttaacgtaatatcaggcgataaagatatgctacagttg
gtttctgataaggtaaccgtaagtctaacaaaaaagggtatttctgatgtggaacgatat
acccctgaatacatgaaagaaaagatggaaatttctccagaacaaatcattgatttgaag
gcattgatgggggatagttctgataatataccaggagttccagggataggagagaaaacg
gctaccaagttattaaaacaatacgggacagtagaatccgtatataaccatgttgatgat
gttagagggaaaaaattgaaagagaatttggttacatataaagcggacgcatttatgagt
aaagatcttgttacgattaactgtgattctccgataaccatatctatcgatgaccttgct
tatgagggatatgaaaaagcgaaactaagtacagtctttaaagaacttgagtttcaatct
ttattaagcagaattgatttggattcagtcagtgaaggtagcgatgaaaggtctttaaaa
gaaattgatttaacgattgttcatgaggtaactactgatatgttcaccgggaacgaagca
ttagtggttgaaatgatcgcggaaaattatcatacgagatctattaatggaattgggctc
gttaatgaaagcgatgcatacttcatacctgttgacgtggctctagactcggatgcattt
aaagactgggcggaagacagcagcaaaacgaagagcgtatttgacgccaaaaagacgttg
gttgcattattaaatcatggaattcatattaaaggcattacatttgatatgttgctgact
tcatacttgcttaatccatccgataataaccatgatatacccgcaattggcaatagaatg
ggaaaaaccgatgtattatacgatgaagaggtatatggtaaaggcgcaaaattaaaagtg
cctgaacaaacaatgctagcagaacacgtcgcacggaaagcttccattttgtattattta
aaagaggaaatggaagataaactaaaagcgaacgaacaatatgaattatgccaagaattg
gagatgccacttgcattgatattgggagaaatggagcatacaggtgttcgagttgatcgt
gatcgtcttcatgacatggacaaggaccttaatcagcggttaaaagatttggaaaaagaa
gtttatgatttagctggtgaaacgtttaatttgaattcaccgaaacaattaggaccaatc
ctatttgaaaagctgggcttgccagttattaaaaaaacaaagacaggttattcgacagca
gcggatgtactcgagcaattagaagataagcatgaaattataccgaaactgcttctgtac
cgacaattaggcaaattacactctacgtatatcacagggcttttaaaggttgtaaatgat
gatacgagtaaaatccatacacggtttaatcaagcattaactcaaactgggagattaagt
tccattgaacccaacctgcaaaatatcccgattcgattacaagaagggcgcaaaattcgt
caggcctttgtgccagaggaaaaggaatgggtcatgtttgctgcggactattcacagatt
gaactgcgggtattagcacatattgcaaatgatgataagctaatctcggcatttaaaaac
aatgtggatattcatacacaaacagcgatggatgtattccatgttggaaaagacgaaata
acagcgaatatgcgacgtcaggcaaaagctgttaattttggaattgtgtatggaataagt
gattatggtctttcgcaaagcttgggaataacacgtaaagaggcgaaacaatttattgaa
cggtattttgaaagttatccaggtgtaaaaacgtatatggaagatattgtccaagaagca
aagcaccaggggtatgttacaacattaatgaatcgtagaaggtacttgccagaaattacg
agccgcaattttaatacacgaagcttttcggagcgaacagcgatgaacacgcctattcaa
ggcagtgctgctgatattataaagaaagcaatgattgatcttcatggaaagttaaaagaa
gagaaacttcaagcacgtatgctacttcaagtacatgatgaattaattattgaagcacca
aaagaggaaatagaaaaattaaaagaaatagtaccagcggcaatggagcaaaccgtcgaa
ttgatcgtaccattggaagtcgattatgcttatggaagcagctggtttgatgctaaataa
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