Virgibacillus natechei: OLD84_12405
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Entry
OLD84_12405 CDS
T08602
Symbol
menD
Name
(GenBank) 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase
KO
K02551
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:
2.2.1.9
]
Organism
vnt
Virgibacillus natechei
Pathway
vnt00130
Ubiquinone and other terpenoid-quinone biosynthesis
vnt01100
Metabolic pathways
vnt01110
Biosynthesis of secondary metabolites
vnt01240
Biosynthesis of cofactors
Module
vnt_M00116
Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol
Brite
KEGG Orthology (KO) [BR:
vnt00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
OLD84_12405 (menD)
Enzymes [BR:
vnt01000
]
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.9 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase
OLD84_12405 (menD)
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Motif
Pfam:
TPP_enzyme_N
TPP_enzyme_M_2
TPP_enzyme_C
TPP_enzyme_M
Motif
Other DBs
NCBI-ProteinID:
UZD14930
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Position
complement(2386909..2388648)
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AA seq
579 aa
AA seq
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MNHIEVLTRYTANFIDELSKNGLTDIVISPGSRSTPLALTASEHKGIKEWIILDERSAAF
FALGIAKETKRPVALICTSGTAAANYFPAIVEAYYSRVPLLVLTADRPHELRDVGAPQAI
EQIKLYGDYVKWFHEMALPEATPNMLGYVRSKAGIAIYKAEEGNAGPVHLNFPLREPLHI
DFSLDNIWGSENEKPFTSTFDGMKKLPDQQVQQLVDRLQRKKKGIIVCGPQINEHFAEAI
TRLAAKWGLPILADPLSQVRAGNHDKTQIIEGYDAILRSEAVREQLKPDFIIRFGAMPVS
KPYLFYVKQHQHATQFIVENHAGYREPAGNRTEIIFADPILLCEDLIAASPGMDVDSHWL
RTWQDMNQTAKKHLLSGSSNQVTEGEAVRGLMDVIPTNSSLYVGNSMAVRDVDTFFMTTD
KHISILANRGANGIDGMISSGLGAATTGKPITLLLGDLSFFHDMNGLLASKQYKLNLTIV
LINNNGGGIFSFLPQAKDPKHFEALFGTPVDIDFGQAITMYGGSHTVVTHEAELKDVLTT
SYQELGLSVVEVKTERTENVEWHREKWQAIEQELLKKGE
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgaaccatatagaagttttaacacgttatacagcaaatttcatagatgaactttcaaaa
aacggcttaacggatattgttatttcaccaggatccagatcaacgcctcttgcattaaca
gcgtctgagcataaaggtattaaagagtggatcattcttgatgaacgatctgctgccttt
tttgcactaggtattgccaaagaaaccaaacgtccagttgcccttatttgtacttctggt
acagcagcagctaattattttcctgcaattgtcgaagcatattatagtagggttccctta
ctggttctaacagctgatcgcccacatgaattaagagatgtcggtgcgccacaagccatt
gaacaaattaaattatatggggactatgtaaaatggtttcatgaaatggcattgcctgag
gctacacctaatatgttaggatatgtaagaagcaaggcaggaattgccatttataaggct
gaagaaggaaacgcaggacctgtccatttaaattttccattacgagagccgcttcatata
gacttttctttggataatatatgggggagcgagaatgaaaaacccttcacttcaacattt
gatggaatgaaaaaactgccagatcaacaagtacaacaacttgtagacagactccaacgt
aaaaagaaaggcattattgtttgtggaccacagataaatgaacattttgcagaagccatt
acacgacttgcagcgaaatggggacttcctatacttgcggatcccttatcccaggtgaga
gcaggcaatcatgataaaactcaaattattgaaggttatgatgctattttgcgtagtgaa
gcagttcgtgaacagctgaagccagacttcattatacgttttggagcaatgcctgtatcc
aagccctatcttttttacgtaaaacagcatcaacatgccacgcagtttattgtggaaaat
catgcaggataccgagaacctgcaggtaatagaacggaaattatttttgccgatccaatc
ttactttgtgaagatcttatagcagcatcacctggtatggatgtagatagtcactggttg
agaacatggcaggacatgaatcagacagcaaaaaaacacttactgtctggatcaagcaat
caagtaactgagggagaggctgtaagaggtctaatggatgttattcctactaacagcagt
ttatatgttggtaacagcatggcagtgagagacgtggatacattcttcatgacaacggat
aagcacatttccattttagccaatcgtggagctaacggaatcgatggaatgatatcaagt
ggacttggtgccgctactactggaaagcccataaccttattgcttggagatttgtctttc
tttcatgacatgaatgggttactggcgtcaaagcaatataagcttaatctaacaatcgta
ttaattaataataatgggggcgggatcttttcctttttaccacaagcaaaggatccaaaa
cactttgaagcattgtttggcacgccggtggatattgattttggacaagcgattacgatg
tatggtggaagtcacaccgtcgttacgcatgaagcggaactaaaagatgtactcacaacc
agttatcaggagctagggttatccgttgtcgaagtgaaaacggaaagaactgaaaatgta
gaatggcatcgtgaaaagtggcaagcaattgagcaagaactcttaaagaagggggaatga
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