Virgibacillus natechei: OLD84_18960
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Entry
OLD84_18960 CDS
T08602
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
vnt
Virgibacillus natechei
Pathway
vnt03420
Nucleotide excision repair
vnt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vnt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
OLD84_18960
03430 Mismatch repair
OLD84_18960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vnt03400
]
OLD84_18960
Enzymes [BR:
vnt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
OLD84_18960
DNA repair and recombination proteins [BR:
vnt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
OLD84_18960
MMR (mismatch excision repair)
Other MMR factors
OLD84_18960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
UvrD_C_2
AAA_19
Viral_helicase1
AAA_22
AAA_30
SLFN-g3_helicase
DEAD
NACHT
Cupin_3
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
UZD12934
LinkDB
All DBs
Position
complement(3798426..3800708)
Genome browser
AA seq
760 aa
AA seq
DB search
MDERAQEQQRVDKIMNEIKTKEEKLYKQSKGLKEDVIEQRKTFWDDITVNMDEPDDVIET
QESIKQQAALLSEKERFHGKVGERLKTLDRLKHSPYFGRIDFMEDSYPEKEAIYIGISSL
MDKDDKDFLIYDWRAPISSLYYDSSTGRAGYRTRETTITGEVSLKRQFIIKHGVIEGMFD
TGVTIGDQMLQQALGNNASTTMKSIVATIQKEQNQIIRNERSSLLVVQGVAGSGKTSAAL
QRIAYLMYRYREELNADNVVLFSPNPLFGSYISNVLPELGETNVRQMTFLNYIEKRLMDN
FTVESPFKQMEYVLTQDESQDYPTRKKSMEYLASLAFKDLIDTYVEKINEAGLRFKRIAF
RGETIVSKQRIYDYFYALGEEIAIPNKLELVVKWLLEEVRTQQKEELNKDWVMEKVELLD
KEDYMEAYHQAEEQEDYGSSISDEEEVLRAQMVKRVFAPLKKRIRNLEFVNIPATYQALF
TEVQLENAPKDWQEIAGHILTQLKERYLTWENATPYLYFQDRILGDTTDRSVRQLIIDEA
QDYSAFQFAYIRHIFPYTRMTLLGDINQAIYTYAMKENPLLPVDHEENQERITLMKSYRS
TKQIVEFTKHFAPGGEMIEPFNREGSKPVLIQDDIRETLLQRVKGFANEGYETTAIICKT
LQESDEIAEVLQGKVEFNQINEETYTFEKGLLILPVYLAKGIEFDAVIIPNASEAHYGKE
SDRTLFYTACTRAMHALAMISVEKPCKFIEEAAGETYEVE
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atggatgaacgtgcccaggaacagcagcgggtcgataaaattatgaatgagattaaaacc
aaagaggaaaaattatataagcagtcaaaaggcttaaaagaggatgttattgagcaacgg
aaaacgttttgggatgatatcacagtgaacatggatgaacccgatgatgtcattgagacg
caggaaagtattaagcagcaagcagcacttctatcggagaaggaacggtttcatggaaag
gtaggagagaggctgaaaacactggatagacttaaacattctccttattttgggcgaatt
gattttatggaggattcctacccagagaaagaagctatttatatcggtatttcctcgctc
atggataaagatgataaggattttctcatctatgattggcgtgcacctatttcgagtctt
tactatgactcttccactggaagggcagggtacaggactcgtgaaacgacaattacaggt
gaagtttcactaaaaaggcagttcatcattaagcatggtgtcattgaaggcatgtttgac
acaggggtaaccatcggtgatcagatgttgcaacaggcactcggaaataatgcgagtacg
acgatgaaaagcattgttgctacgatacaaaaagagcagaatcagattatccgtaatgaa
cgcagtagcctccttgttgtgcaaggcgtcgccggtagtgggaaaacaagcgcagcccta
caacgaatcgcatacttaatgtatcgttacagagaagagctgaatgcggataatgtcgta
ctcttctcgccgaacccgctatttggcagctatatttccaatgtattgccagagcttggt
gagacgaacgtgagacaaatgactttcctgaattatattgagaaacggctgatggataac
tttacagtggagtccccatttaagcaaatggagtacgttctgactcaagacgagagccaa
gactatccaacacggaagaaaagcatggagtatttggccagtcttgcttttaaagatcta
attgacacgtatgtggaaaaaataaatgaagctggacttcgatttaaacgtattgctttt
cggggcgaaacgattgtttccaagcagcgaatttatgattatttctacgcgcttggtgaa
gaaattgcaattccgaacaaactggaattagttgtaaaatggttgcttgaggaagttcga
acacagcagaaggaagaattgaataaagactgggtcatggaaaaggtcgaattgcttgat
aaggaagactatatggaggcctatcatcaggcagaagaacaagaagactacggcagcagt
atatcggatgaggaagaagtcctacgtgcccaaatggtcaagcgtgtttttgcaccactg
aaaaaacgcatcaggaatcttgaatttgttaacattcctgcaacctatcaagcgttgttc
actgaagtgcaattagaaaatgccccaaaggattggcaggagattgctggacatattcta
acacagctgaaggaacggtatttgacatgggaaaatgcaaccccttatttatactttcag
gatcgtattttaggggatacgacggatcgttcggttcgtcagctgattatcgatgaagcc
caagactattctgcattccagtttgcttacattagacatattttcccgtatacacgaatg
acgttgcttggtgatattaatcaagcgatttatacgtatgccatgaaggaaaacccgctc
ctgccagttgatcatgaagaaaaccaagaacgaattacactaatgaaaagttatcgttcg
acaaagcagatcgtagaatttacgaagcattttgcccctggaggagaaatgattgagcca
tttaaccgggaaggaagtaagcctgtgcttattcaggatgatataagggaaacattgctt
caacgtgtgaaaggatttgcgaacgaaggttatgaaacgacggccatcatttgtaaaaca
cttcaggaaagtgatgagatagctgaagtcctgcaaggaaaagtggaattcaatcaaata
aatgaagaaacctatacgtttgaaaaagggctcctcattcttcccgtttatttagcgaag
ggaatcgaattcgacgcagtcattattccgaacgcttccgaagcacactatggcaaggaa
tccgacagaacgcttttctacactgcttgcacgcgggcaatgcatgcattggcgatgatt
tctgttgagaagccgtgtaagtttattgaggaagcggcgggagagacgtatgaggtggaa
tag
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integrated database retrieval system
