Vibrio navarrensis: IF132_01820
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Entry
IF132_01820 CDS
T07785
Name
(GenBank) cryptochrome/photolyase family protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
vnv
Vibrio navarrensis
Brite
KEGG Orthology (KO) [BR:
vnv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vnv03400
]
IF132_01820
Enzymes [BR:
vnv01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
IF132_01820
DNA repair and recombination proteins [BR:
vnv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
IF132_01820
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
Motif
Other DBs
NCBI-ProteinID:
QOD68235
LinkDB
All DBs
Position
2:complement(408390..409940)
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AA seq
516 aa
AA seq
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MKFDTLRLILGDQLNREHSWFQQPNENTLYVMAELAQETGYVKHHVQKICAFFAAMRAFA
QELRQAGHHVCYFTLDESAAYADLPALLHALCDSHSIRYFEYQQPDEYRLHQQLAALALP
VESLRCIDSEHFLLPFSDISNHFKPGQHRLMEHFYRQMRKQSGILLDTDGKPEGGKWNYD
GKNRRKLSAKDIAELPKPLEFRNDVRPILSLLEKHQVDHFGQADPWLLWPINRAQSLTLL
AHFCQVCLPRFGYFQDAMTGEHESQWSLYHSRLSFAINSKILSPREVIDAAIRAYHQAKG
AIDIAQIEGFVRQILGWREYVRGVYWSNMPHYATLNYWQASRPLPSYFWTGKTKMRCLQH
ALTQSLQHAYAHHIQRLMVIGNFALLSQCHPDEVDAWYLGVYIDALEWVEMPNTRGMALF
ADGGIVGTKPYTASGAYIDKMSDYCKKCHYQVKQRSGTGSCPFNSLYWHFVHQHDALFSQ
HPRLGMVYRNWLTKPEHEQQAILETAKHYLIHLESL
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttgacacgctacgcctgattttgggtgatcaactcaatcgagaacactcctgg
tttcagcagcccaatgaaaacactttatatgtgatggctgagcttgctcaggaaacgggc
tacgtgaagcatcacgtgcaaaaaatctgcgcctttttcgcggcgatgcgcgccttcgcg
caggagctgcgacaggctggccaccacgtctgctatttcactcttgatgaatcggcggct
tacgccgatctgcctgcgctcttgcatgccctttgtgattcgcactccattcgctatttt
gaatatcagcagccagatgagtaccgcctgcatcaacagctcgctgcattagctttgccg
gtagagagccttcgctgcatcgatagcgaacactttttgctgccgtttagcgatatttca
aaccattttaagcccggtcaacatcgactgatggagcatttctaccgtcagatgcgcaag
caaagcggcattttactcgatacggatggaaagcccgaaggcggcaaatggaattacgac
ggcaaaaatcgccgtaaactaagcgccaaagatattgccgaactgcccaaaccgcttgag
tttcgcaacgacgttcggccgattttatcgctgctcgaaaaacatcaggtcgaccatttt
ggtcaagccgacccgtggctgctctggccaatcaaccgcgcccagtcgcttaccttgctg
gcgcatttttgccaagtctgtctgccaagatttggctattttcaggatgcgatgacgggc
gagcatgagagccagtggagcctataccacagtcgactctcctttgcgattaacagcaaa
atactctcgccccgagaggtgattgacgcggccattcgcgcttatcatcaagccaaaggg
gccatcgacatcgcgcagattgaaggctttgttcgccagatccttggctggcgcgagtac
gtgcgcggggtttactggagcaatatgccgcactacgcgacgctcaattactggcaagct
tcgcgtccgctcccgagttatttctggacaggcaaaaccaaaatgcgctgcctgcaacac
gcactgacgcaatctctgcaacacgcctacgcgcaccatatccagcgcttgatggtgatt
ggcaattttgcgctgcttagccagtgccaccccgatgaagtggatgcgtggtatctcggc
gtctacatcgacgcattagagtgggtagaaatgcccaacactcgcggcatggcgctgttt
gccgatggcggaattgtcggtactaaaccctacactgccagcggcgcatacatcgacaag
atgagtgattattgcaaaaagtgccactatcaggtaaagcagcgcagcggcacgggttct
tgcccgttcaacagcctctattggcactttgttcatcaacatgatgcgctgtttagccaa
catcctcgtcttggcatggtgtatcgtaactggttaaccaagcccgaacatgaacagcaa
gcgatactggaaacggccaagcactatttgatccatctagagagcttgtag
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