Vibrio navarrensis: IF132_02230
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Entry
IF132_02230 CDS
T07785
Name
(GenBank) starch-binding protein
KO
K01176
alpha-amylase [EC:
3.2.1.1
]
Organism
vnv
Vibrio navarrensis
Pathway
vnv00500
Starch and sucrose metabolism
vnv01100
Metabolic pathways
vnv01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
vnv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
IF132_02230
Enzymes [BR:
vnv01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.1 alpha-amylase
IF132_02230
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Gene cluster
GFIT
Motif
Pfam:
CBM26
Alpha-amylase_C
Alpha-amylase
Motif
Other DBs
NCBI-ProteinID:
QOD68309
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Position
2:505494..507782
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AA seq
762 aa
AA seq
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MKFNKSLSAGLMLFGSLIGGAPSYAQDVPKTAFVHLFEWGWQDIAQECEEFLGPKGFAAV
QVSPPQKSVDNPAWWSRYQPVSYAFEGRSGNRAQFADMVQRCKNVGVDIYVDAVINHMAA
WNRNFPEVPYGVNDFNSCTSDINYSNRWSVQNCDLVGLNDLKTSSEYVRQKIADYMNDAI
SMGVAGFRIDAAKHMPAEDIAAIKSKLHGTPYIFQEVIGAENEPVKPGEYTYIGDVTEFF
FARTLGPKFKHGGIKDLQGIGSWNGWLSSSDAVTFVTNHDEERHNPGQVLSHQGFGNLYF
LGNVFTLAYPYGYPKVMSGYYFNDFDAGPPATGIHTGNACGFDGGDWVCEHRWRGVANMV
AFRNHTAAEWRVTNWWDDGYNQVAFGRGGLGFVVINRDDNKGINQGFATGMPAGEYCDII
SGDFNSQTGTCSGTTISVDSSGYAHFTVASHNAAAIHVGAKVGQTCTDCDKKPATPVTAT
NLCYDNAANHTSPTLYYWGAQPAGSLTNATWPGVTMTANGDFYCHDVETELSSVNVIFSN
QGANKSNDLTTTTGTCYSDGSWKSLADCGFTLITEEDNDNDNATQICYDNQQGFSQPYLY
FWNVDAATPIANATWPGQAMTQQNGQYCYDFGTNLTSLKVIFSDQGSRQTLDMNVSAPNL
CYANGEWKDLSQCTSNTNGGNETWYFRGTANGWGLTALDYNEQTGLYTTTQTFNGEESPA
RFKIDDGSWTESYPSTDYQVGDYATYQIHFNSSTKAISVTQH
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atgaaattcaacaagagtttgtctgccgggctcatgttattcgggagtttaatcgggggg
gcaccaagttatgcccaagacgttcccaaaaccgccttcgtccatttatttgaatggggt
tggcaagatattgctcaagaatgtgaagagttcctaggacctaaagggtttgctgcggta
caagtctcccctcctcagaaaagtgtcgataacccggcttggtggtctcgctaccaaccc
gttagttatgcttttgaaggccgtagtggtaaccgtgcacaatttgcggatatggtgcaa
cgttgtaaaaacgtaggggtagacatttatgtggatgccgtcattaaccatatggcggca
tggaatcgcaacttcccagaagttccatatggagttaatgactttaatagctgcaccagt
gacatcaactattctaatcgctggtcagtacaaaactgtgatcttgtcggacttaatgat
ctcaaaaccagttctgagtatgttcgccaaaaaattgcagactacatgaatgatgcaatc
agtatgggggtcgctgggtttcgtattgatgcggcgaaacatatgccagccgaagatatc
gcggcaataaagagtaagttacatggcaccccttatattttccaagaagtgatcggagcg
gaaaatgagccagtaaaaccgggggaatacacttatattggtgatgttactgagttcttc
tttgctcgcaccctaggacctaagtttaagcacgggggaattaaagacttacaaggtatt
ggttcttggaatggttggctaagcagcagcgatgccgtgacttttgtaaccaaccatgat
gaagagcgccataacccagggcaagtactcagccatcaaggctttggtaacctctacttc
ctcggtaacgtttttactttggcctatccttatgggtatcccaaagtcatgtcaggctac
tacttcaatgattttgatgcaggcccccccgcaactggcatacatacgggtaacgcctgt
ggttttgatggaggagactgggtttgtgaacatcgctggcgcggcgtagccaatatggtg
gcttttcgtaatcacactgcagcagaatggcgcgtgaccaactggtgggatgatggctat
aaccaagtggcctttggccgtggtgggctaggttttgttgtcattaaccgagacgacaac
aaaggcatcaaccaaggttttgctaccggaatgccagcgggtgaatattgcgacatcatc
agtggtgactttaactcacaaacgggaacatgcagtggcaccaccatcagtgtagacagt
tcaggttatgctcatttcaccgtggcttctcataatgcggcggccattcatgtcggagca
aaagtaggacaaacctgcaccgattgtgataaaaaaccagcaactcccgtcacagcaacc
aacctctgctacgacaatgccgctaatcacacttcaccaacactctactactggggagca
caaccagcaggctcactcacaaacgccacttggcctggcgttaccatgacggcaaatggt
gatttctattgccatgatgttgaaactgagctttcaagtgtgaatgtgattttttcaaat
caaggtgccaataagagtaacgatctcaccaccactactggaacgtgttatagcgatggt
agctggaaatctttagccgactgtgggtttaccctaatcacagaagaggataatgataac
gataatgccacccaaatctgttatgacaatcagcaaggtttctctcaaccttacctctac
ttctggaatgtggatgcagcaacgcctattgctaacgcaacttggccagggcaagcaatg
actcaacaaaatggtcaatattgctatgactttggtactaacctcactagcttgaaagtc
attttcagtgatcaaggcagccgccaaacactcgatatgaatgtttcagcaccaaacctt
tgttatgccaatggtgaatggaaagatctctcccagtgcaccagcaacacaaatggtgga
aatgaaacttggtacttccgaggaacagcaaacggatggggattaaccgcattggattac
aatgagcaaaccggcctttacacaacaacccaaaccttcaatggtgaagagtcacccgca
aggtttaaaattgatgatggttcgtggacagaatcctacccaagtacggattatcaagtc
ggcgactacgccacctatcagattcatttcaatagcagtacaaaagccatcagtgtgaca
caacactaa
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