Vibrio navarrensis: IF132_02450
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Entry
IF132_02450 CDS
T07785
Name
(GenBank) L,D-transpeptidase family protein
KO
K19236
L,D-transpeptidase YcfS
Organism
vnv
Vibrio navarrensis
Pathway
vnv01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
vnv00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
IF132_02450
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
vnv01002
]
IF132_02450
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vnv01011
]
IF132_02450
Peptidases and inhibitors [BR:
vnv01002
]
Cysteine peptidases
Family C82
IF132_02450
Peptidoglycan biosynthesis and degradation proteins [BR:
vnv01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
IF132_02450
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Ldt_C
LysM
Motif
Other DBs
NCBI-ProteinID:
QOD68346
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All DBs
Position
2:560047..560964
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AA seq
305 aa
AA seq
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MKGKTARLSAYFISLFASSSLWAATFDLPREGSRLIGRIQHHVVEGGETMANIAKHYDVG
FLALMAANKGVDPFLPQEGYVLSVPTQMILPPVEYKGIVINLAELRLYYFEPEINKVHVF
PVGIGRVGRDTPEMVTKISEKRPNPTWTPPASIRKEYLEKGIELPPIVPSGPENPLGEFA
LRLAYGSGDYLIHGTNKDFGIGLRVSAGCIRMEPKDIEWLFSQVQKGDKVTVINQPVKVS
LEPGRIVYLEAHEPLTRSNGVQDELTVPIELDWWMGELNLDDTKARAVLTSQNGVPVEVA
APDFG
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggcaagacggcgcgattatcggcttattttatctcactttttgccagcagcagt
ttatgggcggcgacatttgatttgccgcgggaagggagccgcttgattggccggattcag
caccatgtggttgaaggtggtgaaaccatggccaatattgccaagcactacgatgtcggc
tttcttgctttgatggcggccaataaaggggttgatccttttttgccgcaagagggttac
gtgctctccgtgccaacgcagatgatcctgccgcctgtagaatacaaaggcatagtgatc
aatctggctgagctgcgtctttactattttgaacctgagatcaacaaggtacatgtgttc
ccagtcgggattggtcgtgttggccgagacacgccagaaatggtgaccaaaatcagtgaa
aagcggcctaacccaacgtggacgccgcccgcttctattcgcaaagagtatcttgagaaa
ggcattgaacttcctcccatcgtcccctcaggcccggaaaatccgctcggagaatttgcg
ctgcgtcttgcctatggcagtggtgattatttgatccacggtaccaataaagattttggt
atcggtttgcgtgtgagcgctggttgcattcgaatggagccaaaggacatcgaatggctg
ttttctcaagtgcaaaaaggggataaggtgacggttatcaaccagccggttaaagtcagc
ttggagccggggcgcattgtctatcttgaagcgcatgaacctttgacacgcagtaacggc
gtacaagatgagctgactgtgcctatcgagttggattggtggatgggagagctcaatttg
gatgacaccaaagccagagcggtactgacatcacaaaacggggtgcccgttgaagtggca
gcgccagactttggttaa
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