KEGG   Vibrio navarrensis: IF132_03245
Entry
IF132_03245       CDS       T07785                                 
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
  KO
K11900  type VI secretion system protein ImpC
Organism
vnv  Vibrio navarrensis
Brite
KEGG Orthology (KO) [BR:vnv00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vnv02044]
    IF132_03245 (tssC)
Secretion system [BR:vnv02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   IF132_03245 (tssC)
SSDB
Motif
Pfam: VipB VipB_2 CBX7_C
Other DBs
NCBI-ProteinID: QOD67464
LinkDB
Position
2:744173..745666
AA seq 497 aa
MTTQLENQLDPTTEEQSFSFLEQAIGATKQTEASRAEELIKTLTEEALKGTVTWNKNLTV
TFREAITALDKKISEQLSEVMHHSDLQKLEGTWRGLNYLVMNSETSSTLKIRMMSMTKKE
LHKDLSKAVEFDQSQIFKKVYEAEFGSAGGEPYGALIGDYEFTNHPEDIESLRLMSNVAA
AGFSPFLSAASPALFGFDEWTELSKPRDLEKVFESLEYTQWRAFRESADSRFVSLTMPKV
LARLPYGQATSPVEEFGFEEFDVDEISGIATNAQHNDYCWMNSSYVLGAKLTDAFSKYGF
CTAIRGAEGGGRVDNLPTHFFMSDDGDPDMKCPTEIGITDRRESELGKLGFLPLCHYKNT
NYAVFFGAQTCQKPAKYDSPDATANAAISARLPYMMATSRFAHYLKVMARDKIGSFMEAQ
DVESWLNRWILSYVNASEGGGQEIRAKYPLADARVQVKEIPGTAGAYNAVAWLKPWLQME
ELTTSLRLVAKIPQSGG
NT seq 1494 nt   +upstreamnt  +downstreamnt
atgacaacacagttagaaaaccaattggatccgaccaccgaggaacagtcgttttcgttt
cttgagcaggcgattggagcaacgaaacaaacagaagcgtctcgtgcagaagagttgatc
aagacgctgacggaagaagcgctgaaaggcacggtcacttggaataaaaacttaaccgtt
acgttccgtgaagcgattacggcgcttgataagaagatttctgaacagctttctgaagtg
atgcaccattctgatttgcaaaaattggaagggacgtggcgcggactgaactatctggtg
atgaactcagagaccagctcgaccctgaagatccgcatgatgagcatgaccaagaaagag
ctgcataaagatttgagcaaagcggtggagttcgatcagagtcagatctttaagaaagtg
tatgaggcggagtttggtagtgctggtggtgagccatacggcgccttgatcggtgactac
gagtttaccaaccatccagaagatatcgagagcttgcgcttgatgtcgaacgttgcggcg
gcaggcttttcgccatttttatcggcggcgtcaccagcgttgtttggctttgatgagtgg
acggagctttctaaacctcgcgatttagaaaaagtgtttgaatcactggaatacactcag
tggcgcgccttccgtgagagcgcagactcgcgctttgttagcttgaccatgcctaaagtg
ctagcacgtttgccttatggtcaagctacttcaccagtcgaagagtttggttttgaagag
tttgatgtggatgagatctccgggatcgccaccaatgcacagcataacgattactgttgg
atgaactcatcctacgtactgggcgctaaactgacggatgcgttctcaaagtatggcttc
tgtactgccattcgcggcgcggaagggggcggtcgagtagacaacctgccaacacacttc
tttatgagtgatgacggtgacccggacatgaagtgtccgacggaaatcggcattaccgat
cgccgtgagtcagagctgggtaaattgggtttcctaccgctttgtcactacaaaaacacc
aactatgcggtgttctttggtgcgcaaacatgccagaaacctgcgaagtatgattcgcca
gatgcaaccgccaacgcggctatttcagcacgcttgccttacatgatggccacctctcgc
tttgcccattacttgaaagtgatggcacgcgacaagatcggcagctttatggaagcgcaa
gatgtcgagtcatggttaaaccgctggatcttgagctatgtcaacgcctctgaagggggc
ggccaggaaattcgcgcgaaatacccgctagctgatgctcgtgtgcaggtgaaggaaatc
ccaggcacagcgggtgcttacaacgcggtcgcttggttgaaaccttggctgcaaatggaa
gagttgacaacctcgctacgcttggttgccaagatcccacagtctggtggttaa

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